Protein

View in Explore
UniProt accession
A0A8S5ND84 [UniProt]
Protein name
Stabilization protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,86
Protein sequence
MRVIAGVLKNIQAGYWENLNTNVPSGAASDATNVDFPSGGGVRKRAGFKVVRDSTVFNVGANVQPVYASGLGYLTIGKMGGEYRGPILLDGGDNSFIGNATLPEPRQLLPVGQDVLMLAKSETLKVTGSQRNVGDVGFIEVLAGSASTTYTAVVQGAFGRVSASHTTPPAYNAGLNLSIDNVPIYSNEQTVERGLTRTGKAGWIPAKEGPQYLTRYDLPNQATLNQFVNASGSKGQIFLAGTGWQPGQHLDNSAIAGSTQWNASWGSSYPNMWHPLVLASGSVPQHDWIEWDYRYVRKHLNPEYQARISEATFNYQKAQTEYQLRVAEQTTRSYIAQRLAAQIPGARVFGAIIEVPGATSIAVSDGASGADLRATLKEVSAVTNLPGKATDGTVMLVAGVPFEFTGGIWKERPGGTLSFSQTGLHWLIAKRPPGSTPKANGLDWVAPKAGSWDELSRMVGDHTPVYADIFGGRMVLLTSRGAFVSAVGNPLDVAPSSALSPTADDGYFLELGSGTDPVKAGLLWGSQLLAITSRRAFLVGLGSRDQTSITQLDMEGVGRANVFLARTSRGPVMLAQEGLGTPIRLRLLQPSPEGGRLVSVPLCPQFDEKKVRNVVLYMTSSASGDDLCIWHGAGHARLIDLRGEFPVIRDYKELPDTGWCGYVGDDLWLLYDKFCKQADGEARDFFGPIKATIEFHTPPQSGVYMPDNRHTTKAWTAWLQDGEMTLSAAGFSRTYNQPGEYHSLPIHLPGEHRLRVTSGADPMYIREVQYKLVTRNGKTPSSWS
Physico‐chemical
properties
protein length:784 AA
molecular weight: 84624,44880 Da
isoelectric point:7,69597
aromaticity:0,09056
hydropathy:-0,23801

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5ND84
1 784
Domain Start End Length (AA) Confidence
N-terminal 1 118 118 0,8194
Central domain 119 329 212 0,8429
C-terminal 330 784 454 0,2895
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-118
Central
119-329
C-terminal
330-784

Taxonomy

  Name Taxonomy ID Lineage
Phage Caudovirales sp. ctSxd6
[NCBI] 		2826774 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD92593.1 [NCBI]
Genbank nucleotide accession
BK015140 [NCBI]
CDS location
range 1531 -> 3885
strand +
CDS
ATGCGTGTGATAGCCGGGGTTCTCAAGAACATCCAGGCTGGATACTGGGAGAACCTGAACACCAACGTCCCCTCCGGGGCAGCCTCTGACGCCACCAACGTGGACTTCCCCTCTGGTGGGGGTGTTCGGAAGCGAGCGGGCTTCAAGGTTGTCCGTGACAGCACGGTCTTCAACGTGGGGGCCAATGTCCAGCCTGTCTACGCCAGCGGTCTGGGCTACCTGACCATTGGCAAGATGGGCGGGGAGTACAGGGGACCCATCCTGCTGGATGGTGGTGACAACTCCTTCATTGGAAACGCCACCCTACCGGAACCCCGGCAGCTTCTGCCTGTGGGCCAGGATGTGCTAATGCTGGCCAAGTCCGAGACCCTGAAGGTCACGGGCAGCCAGCGGAACGTGGGTGACGTGGGCTTCATTGAGGTCCTGGCCGGCTCAGCCAGCACCACCTACACGGCTGTGGTCCAGGGGGCCTTTGGTCGGGTCTCTGCCTCCCACACCACCCCACCGGCCTACAACGCAGGGCTGAACCTGTCCATCGACAACGTCCCCATCTACTCCAACGAGCAGACGGTGGAGCGCGGACTGACCCGGACAGGCAAGGCTGGCTGGATTCCTGCCAAGGAAGGCCCCCAGTACCTGACCCGCTATGACCTGCCCAACCAGGCCACCCTGAACCAGTTCGTGAATGCCTCGGGCAGCAAGGGGCAAATCTTCCTGGCTGGCACCGGCTGGCAGCCCGGGCAGCACCTGGACAACTCGGCCATTGCCGGAAGCACCCAGTGGAATGCCTCTTGGGGCTCCAGCTACCCCAACATGTGGCACCCCCTGGTCCTGGCCAGCGGGTCCGTGCCCCAGCATGACTGGATCGAGTGGGACTATCGCTATGTCCGGAAGCACCTGAACCCTGAGTATCAGGCCCGGATCAGCGAGGCCACCTTCAACTACCAGAAGGCCCAGACAGAGTACCAGCTCCGCGTGGCTGAGCAGACGACCAGGAGCTACATTGCCCAGCGTCTGGCTGCCCAGATTCCCGGAGCCCGGGTGTTCGGGGCCATCATTGAGGTCCCCGGGGCAACCAGCATCGCCGTGTCCGACGGGGCCAGCGGGGCTGACCTCCGGGCTACCCTCAAGGAGGTCTCTGCCGTCACCAACCTCCCAGGCAAGGCCACGGACGGGACCGTCATGCTGGTGGCCGGTGTGCCCTTCGAGTTCACCGGAGGCATCTGGAAGGAGCGCCCAGGGGGCACCCTGAGCTTCTCCCAAACGGGGCTCCACTGGCTGATTGCCAAGCGCCCACCGGGCAGCACCCCCAAGGCCAATGGCCTGGACTGGGTGGCTCCCAAGGCAGGGTCTTGGGATGAGCTGTCCAGGATGGTCGGGGACCACACCCCAGTCTATGCTGACATCTTCGGTGGCCGGATGGTCCTCCTGACCTCCCGGGGTGCTTTCGTGTCAGCTGTGGGTAACCCTCTGGATGTGGCTCCTAGCAGCGCCCTGAGCCCCACAGCCGATGACGGCTACTTCCTGGAGCTTGGCAGCGGGACTGACCCGGTGAAGGCTGGGCTGCTCTGGGGCTCCCAGCTCCTGGCCATCACCTCCCGCCGGGCCTTCCTGGTGGGATTGGGCTCCCGGGACCAGACCAGCATCACCCAGCTGGACATGGAGGGTGTGGGCCGGGCCAACGTCTTCCTGGCCCGCACCTCCCGTGGTCCCGTCATGCTGGCCCAGGAGGGGCTGGGTACCCCCATCCGGCTCCGGCTGCTCCAGCCCTCACCGGAAGGTGGTCGATTGGTGTCAGTGCCCCTGTGCCCCCAGTTCGACGAGAAGAAGGTCAGGAATGTTGTGCTGTACATGACCTCCTCGGCCTCCGGGGATGACCTGTGCATCTGGCACGGGGCCGGCCATGCCCGCCTCATTGACCTCCGAGGGGAGTTCCCGGTGATCCGGGACTACAAGGAGCTGCCGGATACTGGCTGGTGTGGCTACGTTGGCGATGACCTCTGGCTCCTCTACGACAAGTTCTGCAAGCAGGCTGACGGGGAGGCCCGGGACTTCTTTGGCCCCATCAAGGCCACCATTGAGTTCCACACCCCACCCCAGTCCGGCGTGTACATGCCTGACAACAGGCACACCACTAAGGCCTGGACAGCCTGGCTACAAGATGGGGAGATGACCCTGTCCGCAGCAGGCTTCTCCCGCACCTACAACCAACCCGGCGAGTACCACTCGCTGCCCATCCACCTGCCTGGCGAACACCGGCTCCGCGTCACCTCTGGTGCTGACCCCATGTACATACGGGAGGTCCAGTACAAGCTGGTGACCAGGAACGGCAAGACGCCTAGCTCCTGGAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f4ce9fe34dadb8de30bf992bb25e2ed9a9880da838541b0291c60eace3739bea
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4787
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50