Protein

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Genbank accession
XCD29342.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLNKLNQPKGSTIGVLKDGRTVQEAIDELEKIKTRNVDPERFRETLTSSDDEVFEKLFAWLATQSDVVGTSSSSYITALPRMIELSGRTYTLTKRHVLDGNFGIQNGTILMSGEGEIIMGLDAGTKTRRHFLKYVHFEYIGSADRDTSLVTMARCFNSVVLFCNFIAGGDTARNRAPRTRYGLFAGSTRCWGFQLIGGEYYGGDCALRVGRANDHTGLTIRPGTVHHSRVINMLLCNPAGAEVSGCNIEHADNGAIGLGITSGTNTSGNAAHGVRINGVYFYNNGNGSSGSNVAPANILIGKDIPGTEGWDRPGELITSSRNTAHSITVSECYIVSPNTQNAWQVNALYGVSFLDNKVGLKGDATIHGVYDGTCANCWAVGNRDQGGKVFQFSSTATNTILTTRKGKWTPKIIGEGTAGNTTLSASGGAYSLDNGMVTVSCFAVVDTKDPNMAGNLNIKLPVACEDQQRGGTGISLTNVPDVPSPNGSIIVIGDTARIMLGSARLQPANVTTGTAIHFSVSYPADVKV
Physico‐chemical
properties
protein length:528 AA
molecular weight: 56196,53630 Da
isoelectric point:7,56688
aromaticity:0,07008
hydropathy:-0,17992

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCD29342.1
1 528
Domain Start End Length (AA) Confidence
N-terminal 1 50 50 0,9799
Central domain 51 399 350 0,9786
C-terminal 400 528 128 0,9866
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-50
Central
51-399
C-terminal
400-528

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage PMBT12
[NCBI] 		3137283 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCD29342.1 [NCBI]
Genbank nucleotide accession
PP554576 [NCBI]
CDS location
range 8968 -> 10554
strand -
CDS
ATGTTAAACAAATTGAATCAACCTAAAGGCTCTACAATCGGTGTGCTCAAGGATGGGCGCACCGTCCAAGAGGCAATCGACGAGCTGGAGAAGATTAAGACCCGCAACGTTGACCCTGAGCGCTTCCGTGAGACACTGACGTCAAGTGACGATGAGGTATTCGAGAAGCTGTTCGCGTGGTTGGCTACTCAGTCAGACGTTGTGGGAACCTCAAGTTCTTCCTATATCACAGCCTTACCTCGCATGATTGAGCTTAGCGGTCGTACCTATACGTTGACTAAGCGTCACGTGCTGGACGGTAACTTTGGTATACAGAACGGTACCATCCTGATGTCCGGTGAGGGTGAGATTATCATGGGCCTCGATGCTGGTACCAAGACTCGTCGTCACTTCCTTAAGTATGTACATTTCGAGTACATCGGGTCGGCTGACCGGGATACCTCACTGGTTACTATGGCCCGCTGTTTTAACTCAGTGGTGCTGTTCTGTAACTTCATCGCTGGTGGGGATACTGCCCGCAACCGGGCACCGCGTACCCGTTACGGCCTGTTCGCAGGGTCCACCAGATGCTGGGGCTTCCAGTTAATCGGTGGTGAGTATTACGGTGGCGACTGTGCGTTGCGTGTTGGACGCGCTAACGACCACACTGGGTTGACCATTCGTCCCGGTACCGTTCACCACTCACGTGTTATCAACATGCTGCTGTGTAACCCTGCTGGTGCAGAGGTGTCTGGTTGTAACATTGAGCACGCAGATAACGGTGCGATTGGCTTAGGGATTACATCAGGTACCAACACCTCCGGTAACGCAGCCCACGGTGTTCGCATCAACGGTGTGTACTTCTATAACAATGGTAATGGTTCCAGTGGGTCAAACGTTGCTCCAGCGAACATCCTCATAGGGAAGGACATTCCGGGGACTGAGGGCTGGGACCGACCGGGCGAGCTGATTACGTCAAGTCGAAACACTGCGCACAGCATTACGGTGTCAGAGTGTTACATCGTTAGCCCAAACACCCAGAACGCTTGGCAGGTTAACGCCCTGTACGGTGTATCCTTCTTGGACAACAAAGTTGGCCTCAAAGGTGACGCTACGATTCACGGTGTGTATGACGGTACGTGTGCTAACTGCTGGGCGGTTGGTAACCGAGACCAAGGAGGCAAGGTGTTCCAGTTCTCCTCTACGGCAACCAACACGATTCTGACTACCAGAAAGGGTAAGTGGACTCCGAAGATTATCGGTGAGGGCACAGCAGGTAACACGACGCTGAGTGCTTCTGGTGGTGCGTACTCTCTGGATAACGGAATGGTCACCGTGTCGTGCTTCGCAGTGGTTGACACTAAGGACCCAAACATGGCTGGCAACCTGAACATCAAACTACCGGTAGCCTGTGAGGACCAGCAGCGGGGCGGTACAGGCATATCGTTGACGAACGTCCCAGACGTGCCGAGCCCGAATGGTAGCATCATTGTGATAGGAGACACCGCTCGAATCATGCTGGGGTCTGCGCGATTACAGCCAGCGAACGTCACGACTGGTACCGCCATCCACTTCTCGGTGTCCTACCCAGCAGACGTTAAGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d1bfacb238cda847e08a0e6b3092306ca2dded934b1bf79cc742149bdbc3c454
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7856
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
This phage originates from the Bacteriophage catalogue of the Bacteriophage Competence Centre, Department of Microbiology und Biotechnology, Max Rubner-Institut, Kiel, Germany Sprotte,S. and Brinks,E. 2020-12-18 — GenBank