Protein

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Genbank accession
BDR26034.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MPYTIKRYSSVNGGSSKPNKTVNDIQIDNTYSSIGLIGSYNESYKSQFFQNMLWKMENFSHTIAPLNPIEGQLWFNPDEKSVKVYISNDKPTSVSSDWKNLGSTILNELTDHESRTGINDPHETTKEQVGLGNVPNVYTFNKTLNLADVLDASICRSNLEVYGTSETYNKTTVNNLFMTKGGTVNNTDRLDGLTSADFVLVDNPVVYRTFDTTSIITNTALTYNNSKGSIVVNTGAGNIDLLSGIRSDGRIASANDTGAMLSFINDNSDPIVTMVLFNRATANNQTAQPVKSYRFTKTNLIIDYDTNPSEMYHTGRIPSNAAVGSLPLNGKAVNTLLLNGIYQSSSPNDNAVVLRDGAGDVHARHIQVSNPDENIETGNLILFRNSNTSDNYVRRANVSSFQSWFRANEPKGVVKAWIQFNGITGSTYKSHNCTLTKLGTGKYRIYYNSFSTPAVGSVVPFVGVTSDGQISTGMAAGTGRLSYNSSLVYLRSTTYTDLEFFRTYNINYNNYSLDSFTNVYADANNITFTWFF
Physico‐chemical
properties
protein length:532 AA
molecular weight: 58714,35240 Da
isoelectric point:6,19218
aromaticity:0,10526
hydropathy:-0,38835

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BDR26034.1
1 532
Domain Start End Length (AA) Confidence
N-terminal 1 229 229 0,8646
Central domain 230 428 200 0,2226
C-terminal 429 532 103 0,9929
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-229
Central
230-428
C-terminal
429-532

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage sp. 30-3
[NCBI] 		2972143 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDR26034.1 [NCBI]
Genbank nucleotide accession
LC727698.1 [NCBI]
CDS location
range 70575 -> 72173
strand -
CDS
ATGCCTTACACTATTAAACGTTATTCATCTGTCAACGGCGGCTCTTCTAAACCAAATAAAACCGTTAACGATATACAAATAGACAATACGTACTCTTCTATTGGACTAATAGGATCGTATAATGAATCTTACAAAAGTCAGTTCTTCCAGAATATGCTATGGAAGATGGAAAATTTTAGTCACACTATTGCTCCGTTAAATCCGATAGAAGGTCAATTATGGTTTAATCCAGATGAAAAAAGTGTTAAAGTTTACATAAGTAATGATAAACCTACGTCTGTTTCTTCCGATTGGAAAAATCTAGGATCTACTATTTTAAATGAACTAACAGATCACGAATCAAGAACAGGCATTAACGATCCCCACGAGACAACAAAAGAACAAGTGGGATTGGGAAATGTTCCTAATGTTTACACATTCAATAAAACATTAAATCTTGCAGATGTATTAGATGCATCTATATGCAGATCTAATTTAGAAGTATACGGGACTTCAGAAACTTACAATAAAACTACTGTAAACAATCTTTTTATGACAAAAGGTGGTACAGTAAATAATACTGACAGATTAGATGGCTTAACTAGTGCTGATTTTGTCCTTGTAGACAACCCTGTTGTTTATAGAACATTTGATACAACCAGTATAATCACTAATACTGCGTTAACGTATAATAACTCTAAAGGTTCTATAGTAGTTAACACAGGTGCAGGAAATATAGATTTGTTGTCTGGAATAAGGTCAGACGGAAGAATTGCATCTGCAAACGATACTGGTGCTATGTTATCGTTTATTAACGATAATAGTGATCCTATAGTTACTATGGTTTTATTTAATCGTGCTACTGCAAACAATCAAACAGCACAACCGGTAAAATCATATAGATTTACAAAAACTAATTTAATAATAGACTACGATACTAACCCTAGTGAAATGTATCATACAGGAAGAATACCGTCTAACGCTGCTGTCGGTTCACTTCCACTAAATGGAAAGGCTGTCAATACACTATTATTAAATGGCATTTATCAATCTAGCAGTCCAAACGACAATGCAGTTGTATTAAGAGATGGTGCAGGAGATGTACATGCTAGACACATTCAAGTTTCTAATCCAGACGAAAATATAGAAACAGGAAATTTAATTCTATTTAGAAATTCAAATACAAGCGATAACTATGTTAGACGAGCAAATGTCTCTTCATTCCAGTCGTGGTTTAGGGCTAACGAACCGAAAGGTGTAGTTAAAGCTTGGATACAATTTAACGGAATAACAGGTTCTACTTATAAGTCACATAACTGTACACTAACTAAACTAGGTACAGGGAAATATAGAATATATTACAATTCATTTTCTACGCCTGCTGTGGGTTCTGTTGTTCCGTTTGTAGGAGTTACTAGTGACGGTCAAATATCTACTGGTATGGCTGCTGGCACTGGGAGACTTAGCTACAATTCATCATTGGTATATTTAAGAAGCACTACTTATACAGATTTAGAATTCTTCAGAACATACAATATTAATTATAATAACTATTCTTTAGATTCGTTTACTAATGTATATGCAGACGCTAACAACATAACATTTACATGGTTCTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f76b02316f58210a65fe62b095427f82961aa1a75d57c237fddc1b0f57c6f048
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5759
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole-Genome Sequence of Pseudomonas phage 30-3 Fujiki,J., Nakamura,T., Nakamura,K., Tamamura,K., Ichikawa,N., Ishiguro,Y. and Iwano,H. 2021-07 — GenBank