Protein

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Genbank accession
YP_009854238.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MASSEEIIVIDKLNEVASKLDLRTSEFRSLLNGKMKPSSIYVDRYTKLNQIIELSNGSKLASLSYMENTARISLNQLIENMGICTLVGDTLTAVGLVTNQGRTKINTAADGSLAVVEMRVGDGNGASYVATPTMTDIKRQKWVGSVSFPRADGNDNKLIIFEGIIPIHNEGFTIREAAVYDDAGVMILIANTVEVQKIGNDDKGGNLVYVKLVAQLNSAAERLKFKDFDVNGWSGVDVSTNHAKMSGVSENASHPMSSIEGIEGLAKDLTNLTNIEELVDNTNSITAEDGIVRTSAGMVKLVPPRSGVFKGVVDGIATIGSETSRAYNYGLAQVQNQLQVESSEQYTVDFNLPSAQWGPEGYCVECHVVVRVEGDLTGSYLKFMLVLDPFGAYSIIPIKNVGRKIEVSVDLNKLRIFNGVSGRKLFELFYSNNIPNQLIEGGTVEPPFPSQGILLEKERIKIKTIGDTFVSNGGGSRNATNGSIIINTRGFWVTGWLQTVQKFVLEDRVATSGWSTLQVLANIGQVTSSDSDVIIVHAGAIDLLNLRTPEETAATMGEIVDAIIASGKKAVITAVNQRPPSSLITDKITQLNKLYKELVRTRLNDVVMTEPSAVYDDSMLNATANLSPDGAHPNTLGSWIIGKQLAIVLDKHFKSNDPELLTNYILNPSLSGTNGQLLNGSTGQAPTDWRVQYATPENDGVSVGPGSVVNGDGSWTVRSGNNPSVSNGALVVLRCNVTVPNGSASYRFGMKIKLSDFSNVSVFRLFITGNLVAMGAPEFQVNVPATGLQWDDWVEISTPFNNAYGSTILNCFLRVECNGRGTPVELTIKDPFVYQI
Physico‐chemical
properties
protein length:836 AA
molecular weight: 90326,34500 Da
isoelectric point:5,17243
aromaticity:0,06818
hydropathy:-0,06699

Domains

Domains [InterPro]
DC_1371
STR
75–380
DC_1371 IPR036514
IPR022225
ATT
95–220
IPR022225 IPR013830 DC_2046
SSF52266
STR
505–650
SSF52266
SSF52266
STR
508–646
SSF52266
YP_009854238.1
1 836
Architecture
STR
ATT
STR
STR
RBD
STR 75-94 | ATT 95-220 | STR 221-380 | STR 455-658 | RBD 659-836
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009854238.1
1 836
Domain Start End Length (AA) Confidence
N-terminal 1 598 598 0,7657
Central domain 599 797 200 0,2218
C-terminal 798 836 38 0,9962
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-598
Central
599-797
C-terminal
798-836

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VchM_Kuja
[NCBI] 		2686437 Uroviricota > Caudoviricetes > Pantevenvirales > Kujavirus > Kujavirus kuja
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009854238.1 [NCBI]
Genbank nucleotide accession
NC_048827 [NCBI]
CDS location
range 145196 -> 147706
strand -
CDS
ATGGCAAGCTCAGAAGAAATTATTGTTATAGACAAACTCAATGAAGTTGCGTCTAAACTAGATCTAAGAACATCTGAGTTCAGATCTCTACTCAATGGTAAAATGAAACCATCAAGTATTTATGTTGATAGATATACAAAACTTAATCAAATAATTGAGTTATCTAACGGTTCTAAATTGGCTTCATTAAGTTATATGGAGAACACAGCAAGAATATCATTGAACCAACTTATAGAAAATATGGGAATATGTACACTTGTTGGTGATACTCTAACGGCAGTAGGTTTAGTCACAAATCAAGGAAGAACAAAAATTAATACAGCAGCTGACGGGTCTTTGGCAGTTGTAGAAATGCGTGTAGGTGATGGCAATGGGGCTTCTTATGTGGCTACCCCTACTATGACCGACATCAAGCGCCAGAAATGGGTTGGGTCTGTTTCTTTCCCTAGGGCAGATGGTAATGACAATAAACTCATTATTTTTGAGGGTATAATCCCAATTCACAACGAGGGATTTACTATACGTGAAGCTGCCGTTTATGATGATGCGGGTGTCATGATCCTGATCGCAAATACAGTGGAAGTACAGAAGATCGGCAACGATGACAAGGGTGGTAATCTTGTGTATGTCAAGTTGGTTGCTCAACTTAACAGCGCCGCTGAGCGCTTGAAATTCAAAGATTTTGACGTGAATGGGTGGAGTGGAGTTGATGTTTCTACTAACCATGCGAAAATGTCGGGTGTTAGTGAAAATGCATCACATCCTATGAGTTCTATAGAAGGTATTGAAGGTTTGGCCAAAGATTTGACTAACTTAACGAATATTGAAGAACTTGTTGATAATACTAACTCTATTACAGCTGAAGATGGAATAGTGAGAACTTCTGCTGGTATGGTCAAACTAGTTCCGCCAAGAAGCGGCGTGTTTAAGGGTGTTGTTGATGGTATTGCAACCATAGGAAGTGAAACTTCAAGAGCTTATAATTATGGATTAGCGCAAGTTCAGAATCAACTTCAGGTGGAAAGTTCAGAGCAATACACGGTGGATTTCAATTTACCATCTGCTCAGTGGGGTCCAGAGGGTTATTGTGTTGAATGTCATGTAGTTGTCAGAGTTGAAGGTGATTTGACAGGTAGTTATCTTAAATTTATGCTAGTCCTTGATCCATTTGGTGCCTACTCTATTATACCAATTAAAAACGTGGGAAGAAAAATAGAAGTTAGTGTTGACTTGAATAAACTGAGAATTTTCAACGGTGTTTCAGGTAGAAAATTGTTTGAGCTCTTTTACTCAAACAACATACCTAACCAATTAATTGAAGGTGGTACAGTTGAACCCCCGTTCCCGTCTCAAGGTATTCTACTAGAAAAAGAGCGTATCAAAATCAAGACTATTGGTGATACGTTTGTATCTAACGGTGGTGGTAGCAGGAACGCTACAAATGGATCAATTATCATAAATACCAGAGGTTTCTGGGTTACTGGATGGTTACAAACAGTTCAAAAATTTGTTCTTGAAGATAGGGTAGCCACTTCTGGTTGGTCAACGTTACAAGTTCTTGCCAATATTGGTCAAGTGACTTCTTCTGATTCTGATGTAATAATTGTTCATGCAGGGGCTATAGATTTGCTGAATTTACGTACGCCAGAAGAAACAGCAGCTACTATGGGTGAGATAGTTGACGCAATTATTGCCAGCGGTAAGAAAGCCGTGATCACTGCCGTTAACCAGAGACCGCCTTCAAGTTTGATAACGGATAAAATAACCCAATTGAACAAACTTTACAAAGAACTAGTGAGGACAAGATTGAACGATGTGGTCATGACTGAGCCTAGTGCTGTATATGATGACTCTATGCTTAACGCAACCGCGAATCTTTCACCCGATGGAGCGCACCCTAATACGTTGGGTTCATGGATCATAGGTAAGCAATTAGCTATTGTGTTGGACAAACACTTCAAATCTAATGATCCTGAACTTCTAACAAATTATATTTTGAACCCTAGTTTGTCAGGTACAAACGGCCAACTTCTAAATGGTTCTACTGGTCAGGCACCAACAGACTGGAGGGTTCAGTACGCAACTCCAGAGAATGACGGTGTTAGTGTTGGTCCTGGAAGTGTGGTAAACGGAGATGGTTCTTGGACTGTTAGGTCGGGTAATAACCCTTCTGTAAGTAATGGCGCATTAGTAGTTCTAAGATGTAACGTTACTGTTCCAAATGGGTCGGCTTCATATCGTTTTGGTATGAAAATCAAACTTTCTGATTTTTCTAATGTTAGTGTATTTCGTTTGTTTATTACTGGTAATCTAGTTGCTATGGGTGCTCCCGAGTTCCAAGTTAATGTGCCAGCCACAGGTTTGCAATGGGATGACTGGGTCGAGATATCTACACCATTCAATAACGCTTATGGCTCAACCATTCTAAACTGTTTCCTGAGGGTTGAGTGTAATGGACGGGGTACTCCTGTTGAACTAACTATTAAAGATCCGTTTGTTTACCAAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1ccba84de129aa96ba7867a692abacad1e30d0840bc80ef955aebb70ad3b7994
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5658
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a novel member of the family Ackermannviridae Maina,A.N., Mwaura,F.B. and Jumba,M. 2002-12 — GenBank