Protein

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Genbank accession
YP_009888941.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TSP
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MNPQFAQPKGSTSKETNKDSIARKFGCKKSEVIYAKSGQSLSGYKVIYDKVSQRAYALPSNIGAVTVTSLVDGVLTHSGGTVDLGELAVSRREFDTVQGDFTSGVILKVKNEVIAYSHSRYRWNGTFPKVVDPDSAPNSTDWINVDANPALSELAKSVGASLIGYKPTGTTTTTGTVKGKLDGFIDFANDYCGGPITGQPDLTSQLQQAIIDAFNSGVGDIKIVGDFYISDMILWYPGVRLLGGRYDTTLIRASNTFPVGGTMLRSYRPPLWNAGCHGLALENIYFVGRSAKDLHAVDINDASYFNLEGVRYDLFNKALSFNRWIDETRVDTGGTITYPNAYSVEMGGQSYFGTVTRCYAGSCVTCVDFNGVVNRCTFTSNTWTSSDLAYNFSNPRGVYETNTFITCNIEGVKVVWEWFFSINSPYHNVWINTSIDNGNPDITCLAKDGGRQTFVGLAIFPYGNPSLVNWYNINPNGHRSTVLGTDLGESLPEDQLKTQVREELHTLTGIANKQWAGQQVTETIPAGGYKAINISIPGLKGNSAVIASLSAIYAGVSVSAASNNTGIVAVIINNHSASPVEINAYLSVTGIAKSFL
Physico‐chemical
properties
protein length:596 AA
molecular weight: 64430,49380 Da
isoelectric point:6,10356
aromaticity:0,10403
hydropathy:-0,13356

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–93
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 DC_1937
G3DSA:3.30.2020.50
ATT
1–95
G3DSA:3.30.2020.50 G3DSA:2.10.10.80
IPR040775
RBD
90–140
IPR040775
YP_009888941.1
1 596
Architecture
ATT
RBD
ATT 1-155 | RBD 435-595 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009888941.1
1 596
Domain Start End Length (AA) Confidence
N-terminal 1 203 203 0,9934
Central domain 204 487 285 0,9906
C-terminal 488 596 108 0,9721
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-203
Central
204-487
C-terminal
488-596

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage pertopsoe
[NCBI] 		2713310 Uroviricota > Caudoviricetes > Pantevenvirales > Cvivirinae > Kuttervirus
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009888941.1 [NCBI]
Genbank nucleotide accession
NC_049507.1 [NCBI]
CDS location
range 13347 -> 15137
strand +
CDS
ATGAATCCGCAATTTGCTCAACCAAAAGGTTCTACTTCAAAAGAAACGAATAAAGATAGCATCGCCCGTAAATTTGGGTGCAAAAAGTCGGAAGTCATTTATGCGAAATCAGGACAGTCCTTGTCTGGTTATAAAGTGATCTACGATAAGGTGTCTCAACGTGCCTATGCTCTCCCTTCTAATATTGGTGCTGTAACGGTCACCAGTTTGGTGGACGGTGTCCTCACACACTCTGGGGGCACGGTAGATTTGGGAGAACTGGCTGTTTCACGTCGTGAATTCGATACTGTTCAAGGTGATTTTACTTCGGGGGTTATCCTTAAAGTTAAAAATGAAGTCATCGCGTATAGTCATAGTCGATATCGTTGGAACGGCACTTTTCCAAAAGTTGTTGACCCAGATTCAGCACCAAATTCCACAGATTGGATAAATGTGGATGCCAACCCAGCATTATCTGAATTGGCTAAATCAGTTGGGGCTTCATTAATTGGATATAAACCTACTGGAACAACGACCACCACAGGAACGGTTAAAGGCAAATTAGACGGATTTATAGATTTTGCTAATGATTATTGCGGTGGTCCTATCACTGGTCAACCAGATTTAACTTCTCAACTACAACAAGCAATAATTGATGCATTTAATTCCGGTGTCGGCGATATTAAGATTGTTGGGGATTTTTATATCTCCGATATGATATTGTGGTATCCTGGGGTTCGATTGTTGGGCGGTAGATACGATACTACATTGATTCGAGCTTCTAATACTTTCCCTGTTGGTGGTACAATGTTGCGTTCATATCGCCCACCGTTATGGAATGCTGGTTGTCATGGACTGGCGCTAGAAAATATATATTTTGTTGGCCGGAGTGCTAAAGACTTACACGCTGTGGATATCAATGATGCTTCATATTTTAATCTAGAAGGGGTGCGTTATGATTTATTCAATAAAGCACTTTCATTCAATAGATGGATAGATGAAACTCGTGTTGATACTGGTGGGACTATCACATACCCAAATGCTTATAGTGTTGAAATGGGTGGGCAATCTTATTTTGGTACTGTAACCCGTTGCTATGCAGGTAGTTGCGTTACTTGCGTAGATTTTAATGGGGTTGTGAATCGTTGCACATTCACAAGCAACACTTGGACGTCCAGTGATTTGGCATATAACTTCAGTAATCCTCGTGGTGTTTATGAAACCAACACATTTATCACCTGTAATATTGAGGGTGTGAAGGTTGTTTGGGAATGGTTTTTCTCGATAAACTCCCCATATCATAATGTTTGGATAAATACCAGTATAGACAATGGTAATCCTGATATCACATGCCTCGCTAAAGATGGAGGTAGACAGACTTTTGTTGGGTTGGCAATTTTCCCTTATGGGAATCCGAGTTTGGTTAACTGGTATAATATAAATCCAAATGGTCATCGCAGTACCGTTCTTGGTACAGATTTGGGGGAATCGTTGCCGGAAGATCAATTGAAAACCCAAGTGCGCGAGGAATTACACACATTAACGGGTATTGCTAATAAACAATGGGCAGGACAGCAAGTTACTGAAACTATCCCAGCAGGTGGATATAAAGCTATCAATATCAGTATTCCTGGTTTAAAAGGAAATTCCGCTGTGATCGCTTCTTTATCAGCAATATATGCTGGCGTTTCTGTGAGCGCAGCCAGTAATAATACTGGGATTGTGGCTGTTATTATAAACAACCATTCGGCATCTCCTGTTGAAATAAACGCATATCTCAGTGTCACAGGCATAGCCAAAAGTTTCTTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
43446e2699a0edb809452fc1b3142e6b70b4aae087c58fa5b47d9685329ae9ad
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7423
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50