Protein

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UniProt accession
A0A088DPD4 [UniProt]
Protein name
Putative tail fiber
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
NICVKISATTDSSNYLFGDTVVVSNFKIKLKGDDEYLKPYGVEVIDRENNKIGLNLIGDDTVYNDNDALLSTRPSDFNSSSVDLSSGSNALVTVKTNGAYDYSGVYDIPNPFREYNKKYSLFLSNDGLKNPYYQVDINSSKQVDNISFQLFGTSATNTFLYSKDCKIELFIENTIVKTFNIKGSSGNNSPVNINIDYKDGMFLISVLDSINYINNRINKNAELLTGSGKPNFSLNPNKIGSLYSDTTNKAVYMCIDNTSGANKWVNIVTGDEIKPNLRKIEITCNVRLRSGQYGGCMSGVKIGFDNGYASTKQIVKGLNSGQILLSLDGLGNLSGYSEVSSLTPSSQDIKVDVDTTGIYNDPSYHCVTNIFKEYLGNADQCSLWSDASVKQLKITLLSEKIPNKI
Physico‐chemical
properties
protein length:405 AA
molecular weight: 44525,36740 Da
isoelectric point:5,29594
aromaticity:0,09383
hydropathy:-0,32840

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A088DPD4
1 405
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,4790
Central domain 11 220 211 0,7430
C-terminal 221 405 184 0,4425
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-220
C-terminal
221-405

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage PM1
[NCBI] 		1541693 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIM19607.1 [NCBI]
Genbank nucleotide accession
KM272874 [NCBI]
CDS location
range 1 -> 1217
strand +
CDS
AAAATATTTGTGTAAAAATATCTGCGACAACTGATAGCTCTAATTATTTATTTGGTGATACAGTAGTAGTTAGTAATTTCAAGATAAAACTTAAAGGAGATGATGAGTACCTTAAACCTTATGGGGTTGAAGTTATTGATAGAGAAAATAATAAAATAGGTTTAAATTTAATAGGAGATGATACAGTATATAATGATAATGATGCTTTATTATCTACAAGACCTTCTGATTTTAATTCATCTAGTGTAGATCTTTCTAGTGGAAGTAACGCCTTAGTAACTGTTAAAACTAATGGAGCTTATGATTATAGTGGAGTTTATGATATACCAAATCCTTTTAGAGAATATAATAAAAAATACTCTTTATTCTTAAGTAATGATGGGTTAAAAAATCCTTATTACCAAGTTGATATAAATAGCTCCAAACAAGTTGATAATATATCTTTTCAATTATTTGGAACTAGTGCTACAAATACTTTTTTATATTCTAAAGACTGTAAAATTGAATTGTTTATAGAAAATACTATTGTAAAAACCTTCAATATTAAAGGCAGCTCTGGAAATAATAGTCCTGTGAATATTAATATAGATTATAAAGATGGTATGTTTTTAATATCTGTTCTTGATTCTATAAATTACATAAATAATAGAATTAATAAAAATGCAGAATTACTTACAGGGTCAGGCAAACCTAATTTTTCATTAAACCCTAACAAAATAGGTTCTCTATACTCTGATACAACTAATAAAGCTGTATATATGTGTATAGACAATACTTCTGGTGCTAATAAATGGGTAAATATAGTAACAGGAGATGAAATTAAACCAAACCTTAGAAAAATAGAAATTACTTGTAATGTAAGATTAAGAAGTGGCCAATATGGTGGTTGTATGAGCGGTGTTAAAATAGGATTTGATAACGGATATGCTTCTACAAAACAAATAGTTAAAGGGTTAAATAGTGGTCAAATATTGCTATCTCTAGATGGGTTGGGTAACCTTTCTGGATATTCTGAAGTCAGTTCTTTAACTCCTAGCAGTCAAGATATAAAAGTTGATGTGGATACTACTGGGATATATAATGACCCTTCATATCATTGCGTTACTAATATATTTAAAGAATATCTTGGCAATGCTGATCAATGTTCGCTATGGTCTGATGCTAGTGTTAAACAACTTAAAATAACTTTATTATCTGAAAAGATTCCTAATAAAATA

Genome Context

Genome Context

Tertiary structure

PDB ID
f463a84d042a3b931be0f712a57bb8f2ed0dd87f551808ffb19b01c4bb09e6bc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5441
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50