Protein

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Genbank accession
XYL03292.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MALVIHYTRNEDGTFDVKRYRDNPMNFVVNHVPDGVPVRVFIDEIGEDNDVTEDFEALKENATFHIVESAGGGAIKGVMKIFSVILKPLAKLLSPSVKGASSNLANSQADSPNNSLTDRNNKARPYERSYDICGTVQTIPNNLMSTYKVFNAAGKIVEYGYYDAGRGHLDIHPDGITDGDTRVSDITGTSVAVYAPYTSPNNTSTPQVMVGDPIEQGLYITVESNEVDGVVLKAPNGLGISFSYMSGYPSLSGNIGTIYDPTGGSDFSGVLVPNDTFSLVSAWTNTDVDLSGGGYQVLSVSEGTITFIVPGGLIGRWQEIRPGSFFRGDGEASLQPDNTYEKTLTDWVSINRTEVERIVANIAAANGMYKDNGMYKDNGKSKTLASVTAEIQYQLLDENSVPYGPIYTAQGTVSGRTPDYNGVTIYADLPVVSRVRVRARRVTDLDFNFEGSVVDEITYVNLYGQTRDNTPHYGNRTTVHSMRKQTPRAAEVKQPQLRMIATEMVHKYLGNGVFEDTMTPNTQAVQSLIRLARDPDVGGLNLTVRNMDKLLAVQNEVEAYFGDKQAGEFCYTFDDYKTTMQDIVSTIANAIFCTPYRRGADILLDFERPRMGPEMVFTHRSKAGTSEKWTRTFNDAQVFDSLKFSYIDPKTNVKETITIPETGGVKTETYDSKGIRNYKQAFWAAHRRHQKNILKKISVSFTATEEGIFALPNRAVSVVKGSRMATYDGYITAVNGLTVELSQPVKFTAGDDHYLVLKLRDGGVQSVRVVPGAHDRQVIMTSVPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVPPFGSAFSNGFDNGFN
Physico‐chemical
properties
protein length:858 AA
molecular weight: 94534,62470 Da
isoelectric point:5,38773
aromaticity:0,09674
hydropathy:-0,36841

Domains

Domains [InterPro]
DC_0118
STR
1–691
DC_0118 DC_0808
NF040662
Unmapped
353–838
NF040662
XYL03292.1
1 858
Architecture
STR
RBD
STR 1-691 | RBD 709-852 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYL03292.1
1 858
Domain Start End Length (AA) Confidence
N-terminal 1 231 231 0,9660
Central domain 232 432 202 0,6850
C-terminal 433 858 425 0,1517
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-231
Central
232-432
C-terminal
433-858

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_Sen-P10
[NCBI] 		3453363 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYL03292.1 [NCBI]
Genbank nucleotide accession
PV916286 [NCBI]
CDS location
range 37484 -> 40060
strand +
CDS
TTGGCGCTAGTAATCCACTATACCCGTAACGAAGACGGCACATTTGACGTTAAACGTTATCGCGATAATCCGATGAACTTCGTCGTGAACCACGTTCCCGATGGGGTGCCGGTGCGTGTTTTCATTGACGAAATCGGAGAAGATAACGACGTAACAGAAGACTTCGAAGCACTGAAAGAAAACGCGACTTTCCACATTGTGGAATCAGCTGGTGGTGGCGCCATTAAAGGCGTCATGAAGATTTTTAGCGTTATCCTTAAACCGCTGGCGAAACTATTATCGCCGTCCGTGAAAGGTGCGTCCTCGAACCTTGCGAACTCGCAGGCGGATTCCCCAAACAACAGTCTTACTGACCGTAACAACAAGGCGCGCCCATACGAGCGCAGTTACGACATCTGCGGGACGGTGCAAACAATACCCAATAACCTTATGTCTACTTATAAGGTGTTTAACGCCGCCGGTAAAATTGTAGAGTACGGCTACTACGACGCCGGGCGTGGCCACCTCGACATACACCCGGATGGCATAACGGACGGTGATACCCGGGTATCGGATATAACAGGTACGTCGGTTGCCGTGTACGCACCATATACGTCACCAAATAATACATCCACGCCACAGGTAATGGTAGGAGACCCCATAGAGCAGGGCCTGTACATCACCGTAGAATCTAACGAAGTGGATGGCGTGGTTTTGAAAGCACCCAACGGTCTCGGCATTTCTTTCTCTTACATGTCGGGGTATCCGTCTTTGTCAGGAAACATTGGCACTATATACGACCCTACAGGCGGCTCGGATTTTTCTGGAGTACTGGTGCCTAATGACACGTTTTCGCTGGTGTCCGCGTGGACAAATACAGACGTTGACCTGTCCGGCGGCGGGTATCAGGTGTTAAGCGTATCCGAAGGGACCATTACTTTTATCGTGCCTGGCGGCCTTATTGGGCGGTGGCAAGAAATAAGACCCGGTTCATTTTTCCGCGGTGACGGGGAAGCGTCGCTGCAACCAGACAACACGTATGAGAAAACCTTAACCGATTGGGTTTCAATAAACCGCACCGAGGTTGAGCGCATCGTGGCCAATATCGCCGCTGCGAACGGCATGTATAAAGACAACGGCATGTATAAAGACAACGGCAAATCTAAAACACTAGCGTCGGTTACCGCGGAGATACAGTACCAGCTACTCGATGAAAATAGCGTTCCTTACGGGCCAATATACACGGCGCAAGGAACTGTGTCCGGGCGTACACCGGACTACAACGGCGTCACTATTTACGCCGACCTGCCGGTTGTGTCACGGGTGCGGGTGCGCGCCAGAAGGGTGACAGACCTCGACTTTAATTTCGAGGGGTCCGTAGTCGATGAGATAACGTACGTTAACTTATACGGGCAAACACGTGACAACACCCCACACTACGGCAACAGAACAACAGTACACTCGATGCGCAAGCAGACCCCACGTGCTGCGGAAGTAAAGCAACCGCAGTTACGTATGATTGCCACCGAAATGGTACACAAATACCTTGGTAATGGTGTTTTCGAAGATACGATGACCCCCAATACCCAGGCCGTGCAATCTCTTATCCGCCTGGCCCGTGACCCGGATGTGGGAGGTTTAAATCTGACAGTACGCAACATGGATAAGTTACTTGCCGTGCAGAACGAGGTCGAAGCGTATTTCGGCGACAAACAGGCGGGGGAATTTTGCTACACGTTCGATGACTATAAAACCACTATGCAGGACATAGTTAGTACTATAGCCAACGCTATCTTCTGTACGCCATACAGGCGTGGGGCGGATATCCTTCTCGATTTTGAACGCCCTCGCATGGGCCCCGAGATGGTGTTCACCCACCGAAGCAAGGCTGGTACTTCCGAAAAATGGACCAGAACCTTTAACGATGCTCAGGTGTTCGATAGCCTTAAATTCTCGTACATAGACCCAAAAACAAACGTTAAAGAAACAATAACAATACCAGAAACTGGTGGGGTTAAAACGGAGACCTACGATTCAAAAGGTATTCGCAACTATAAGCAGGCTTTCTGGGCAGCGCACCGCCGCCACCAGAAGAACATTTTAAAGAAAATTTCAGTGTCGTTTACCGCCACGGAAGAGGGTATTTTTGCCCTTCCGAATCGTGCCGTTAGTGTGGTTAAGGGTTCGCGTATGGCTACCTACGATGGCTACATAACCGCAGTAAACGGGCTCACCGTAGAACTGTCACAACCAGTTAAGTTCACAGCGGGAGATGACCATTATTTGGTTCTGAAGTTACGTGATGGCGGAGTCCAAAGTGTTCGTGTTGTCCCTGGCGCACATGACCGACAAGTAATTATGACGTCTGTGCCGCAAGAAGCCATTTACACTGGTAATAGCGCTTTGAAAACTGAATTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACGGTAGACCCTGGCGATGACAGAACAGTCAAAATAACCGGGTTTAACTATGACAAGGATTTCTATAAGTTTGACAACGTACCTCCTTTCGGTAGTGCGTTCTCCAACGGATTCGATAACGGTTTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8c38f875589942d5e71980a4a1a1eb6f87c8798f9511e3815a6725a9e4d1ef48
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8449
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50