Protein

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Genbank accession
XRM24307.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MGRFTDPQSSADKLNNIKTISNQGGNIVIEMDNGDQFNLGPIAASNSLPVKFSDGTTGDITTLGVGSGLTESVNGGEVTLNAQVSSDDLAKLRAGSVTHVAITGDEMTVTHGDGAAAKYQLPTGGAPGQPSDVTELRNEITFLENTLTSEGKDINGLKQQFGRYDHEMSTVEGASVWRGTSAPDYPDDPKHSYYWTFHDTPAREAIEPVPNPTNGPLVDGTLLYVANQNKEATVRLEAQTGQNIDGATSYTVQPNTFAVLVLTGVTWNLIESGYIPDSLFDLTNRILNQAQQEGLFDDVANEHQGGLKLFLTEQERDQFTQDAANKKYLYKSACLVVTNTDAVSQWFYWSGTKTDGTDGAWQQLKEDSTQPTTSGITLKDPQTDAAGVTELEIQPPLKFEVEQNEPSKAVVYIDQRAYEPQHAASCLLQLDSIEPVEWE
Physico‐chemical
properties
protein length:439 AA
molecular weight: 47645,71600 Da
isoelectric point:4,37145
aromaticity:0,07517
hydropathy:-0,51025

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VibP_ZCVPP1
[NCBI] 		3411026 Viruses > unclassified bacterial viruses >
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRM24307.1 [NCBI]
Genbank nucleotide accession
PV295601.1 [NCBI]
CDS location
range 33155 -> 34474
strand +
CDS
ATGGGACGATTCACAGACCCGCAATCAAGCGCAGATAAGTTAAACAACATCAAGACCATATCAAACCAAGGCGGCAACATCGTCATTGAAATGGACAATGGCGACCAGTTCAACCTTGGGCCTATTGCTGCATCAAACTCACTTCCTGTTAAGTTCTCGGATGGAACAACAGGGGACATCACAACGCTTGGTGTTGGTTCTGGATTAACAGAGAGTGTTAACGGTGGCGAGGTAACATTAAACGCACAAGTATCAAGTGACGACCTAGCCAAACTGAGAGCAGGAAGCGTAACGCACGTTGCAATCACTGGCGACGAAATGACAGTAACGCATGGTGATGGTGCAGCAGCTAAGTATCAACTGCCTACTGGTGGCGCGCCCGGTCAACCTTCAGACGTAACCGAACTAAGAAACGAGATTACATTCCTAGAGAACACGCTCACATCAGAAGGCAAAGACATCAACGGGCTGAAACAACAGTTCGGGCGATATGATCATGAAATGAGCACAGTGGAAGGTGCAAGCGTTTGGCGAGGCACATCAGCACCAGACTATCCAGATGACCCAAAGCATTCCTATTACTGGACATTCCACGACACGCCAGCACGTGAAGCAATAGAGCCTGTGCCAAATCCAACCAATGGCCCGCTTGTTGATGGGACTTTGTTGTACGTTGCAAACCAAAACAAGGAAGCAACAGTAAGGCTAGAGGCGCAAACAGGTCAGAACATTGATGGGGCGACAAGCTATACGGTACAACCAAACACTTTTGCTGTTCTTGTGCTTACTGGTGTTACTTGGAATCTTATCGAGTCTGGCTACATTCCAGATTCACTCTTTGACCTAACCAATAGAATCCTTAACCAAGCGCAGCAAGAAGGATTATTTGATGATGTGGCCAACGAGCATCAAGGCGGTCTAAAACTATTCCTCACAGAGCAGGAGCGCGACCAGTTCACGCAAGACGCAGCAAACAAGAAGTATCTATACAAAAGCGCTTGTTTAGTTGTTACCAACACAGACGCAGTAAGTCAGTGGTTCTATTGGTCAGGCACTAAGACAGATGGCACAGATGGAGCATGGCAGCAGCTGAAAGAAGACAGCACGCAACCGACAACATCTGGCATAACACTAAAAGACCCGCAAACAGATGCGGCAGGAGTTACAGAGCTTGAAATTCAGCCGCCACTTAAGTTTGAAGTAGAGCAAAACGAACCATCAAAGGCAGTGGTATACATAGACCAAAGAGCATACGAGCCACAACACGCTGCATCATGCCTATTGCAACTTGATTCCATTGAACCTGTTGAATGGGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
70dfbb30a2712a2429579c94855b182565911b6dd8578e62065087fa5cd9cb37
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4658
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50