Protein

View in Explore
Genbank accession
ARQ95332.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MPSDPETVVTGYHFERNGELISQVLDKLPPRAPTKDELKAYLAELRFNKEVGGMMSATFGYLLTDRDTRAIIAQTIQSIDLGVVQEPIVWKATGGFVELNRAALVGIATETVAFVQMTFDKEAEVSARIDSGELVKKVDVATAFAT
Physico‐chemical
properties
protein length:146 AA
molecular weight: 15950,05350 Da
isoelectric point:4,80559
aromaticity:0,07534
hydropathy:0,00616

Domains

Domains [InterPro]
DC_2197
STR
3–146
DC_2197
IPR025484
STR
35–141
IPR025484
ARQ95332.1
1 146
Architecture
STR
STR 3-146
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bradyrhizobium phage BDU-MI-1
[NCBI] 		1983459 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bradyrhizobium diazoefficiens
[NCBI] 		1355477 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARQ95332.1 [NCBI]
Genbank nucleotide accession
KY940711.1 [NCBI]
CDS location
range 62831 -> 63271
strand -
CDS
ATGCCCTCAGATCCGGAGACCGTTGTCACCGGCTATCACTTCGAGCGAAACGGTGAGCTGATCTCGCAGGTGCTCGATAAGCTTCCGCCGCGGGCCCCGACCAAGGACGAGCTGAAAGCCTACCTTGCGGAGCTGCGGTTTAACAAGGAGGTCGGCGGCATGATGTCGGCGACCTTTGGCTATCTTCTGACCGACCGCGACACGCGGGCGATCATCGCTCAAACCATCCAGTCGATCGACCTTGGCGTTGTCCAGGAGCCGATCGTGTGGAAGGCGACCGGCGGATTTGTCGAACTCAATCGAGCGGCGCTCGTCGGTATCGCTACCGAGACCGTCGCCTTCGTGCAGATGACCTTCGACAAGGAAGCTGAAGTGTCGGCCAGGATCGACTCGGGCGAGCTGGTCAAGAAGGTCGACGTCGCTACCGCCTTCGCCACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c6101f17b27b2d04917a54b6a86c81e37a02003371134a36483a062bfb08a489
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8336
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of a novel bacteriophage infecting Bradyrhizobium diazoefficiens USDA110T Liu,J., Yu,H., Huang,Y., Yu,Z., Fan,G., Jin,J., Liu,X. and Wang,G. 2017-07-27 — GenBank