Protein

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UniProt accession
A0A8S5V8Y0 [UniProt]
Protein name
Neck appendage protein
RBP type
TSP
Evidence RBPdetect
Probability 0,79
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MDITIQNVRSPALEHNGRYYKVFQPRTRDELLKLHHMGCVGDTVLTDIQLEQGDFPTSFVEPTVTQRTLSGLFKDMRSIELELRDPNSTLWGKIQQNNQGALTQFFDRDVKSAIAQTASEIRQEVRNAANSARVQVTPEGVTIGSTTLTGEQLATTISTSSKGVDIIAPRVRVKSDMIVDGAVTAGKLAAGSVTAENIQAGAITGDKINVDDALIRNLTARDALIDKLTSKEVFATKIESVVSSSTFLEAYQGKIGGFTLGQFDQGGGRWISGVNHFAVGMGNGEGRGTRTAFWANWGDSWNTIGDRAWYVNTDGKMYCKNDSIFYRQVTFDTNCSVDCYGTQTFYKSPVFIHGIELGEADIYGNGSNPKGGKNAVVWWNQVGSGSVKYWGDKSSDRRLKENITDTSVKALDKINRLNMVAFDFIESKKHEEIGLIAQEAETIIPEVISRDPDNPDGYLHIDYTAFVPYLLKAVQELDQKIKEMEKLHG
Physico‐chemical
properties
protein length:489 AA
molecular weight: 53962,93730 Da
isoelectric point:5,53711
aromaticity:0,08384
hydropathy:-0,37280

Domains

Domains [InterPro]
DC_0720
STR
1–458
DC_0720
IPR012892
RBD
14–135
IPR012892 IPR030392
IPR030392
CHP
395–447
IPR030392 DC_2094
A0A8S5V8Y0
1 489
Architecture
STR
RBD
STR 1-458 | RBD 459-488 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5V8Y0
1 489
Domain Start End Length (AA) Confidence
N-terminal 1 299 299 0,7743
Central domain 300 478 180 0,2105
C-terminal 479 489 10 0,9750
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-299
Central
300-478
C-terminal
479-489

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctmva1
[NCBI] 		2825656 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAG03209.1 [NCBI]
Genbank nucleotide accession
BK016225 [NCBI]
CDS location
range 5947 -> 7416
strand -
CDS
ATGGACATTACCATTCAAAACGTTCGTTCGCCTGCTCTTGAACATAACGGACGGTATTACAAGGTATTCCAGCCACGGACACGAGACGAACTGCTGAAATTGCACCACATGGGATGTGTGGGAGACACGGTGCTGACGGATATCCAGCTAGAGCAAGGGGATTTCCCTACTAGCTTCGTGGAGCCGACAGTAACACAACGTACCCTGTCAGGTCTCTTTAAGGATATGCGCTCAATAGAGCTGGAACTGAGAGACCCGAACAGTACTCTCTGGGGTAAAATCCAGCAGAATAATCAAGGGGCGCTGACTCAGTTTTTTGATAGAGACGTAAAGAGTGCTATCGCTCAGACAGCTAGTGAAATCAGGCAGGAAGTGCGAAACGCTGCTAACAGTGCAAGAGTGCAAGTGACGCCAGAAGGTGTTACTATCGGCTCTACTACTCTAACGGGTGAGCAGTTAGCTACGACCATTTCGACCAGTTCGAAAGGCGTGGACATTATCGCTCCACGAGTTCGAGTGAAGTCCGACATGATTGTGGACGGTGCGGTGACTGCTGGTAAGTTAGCAGCTGGGTCTGTTACTGCTGAAAATATCCAAGCTGGTGCCATTACTGGCGATAAAATCAACGTAGACGATGCACTTATTCGGAATCTGACTGCTAGAGATGCCTTGATTGATAAGTTGACATCTAAGGAAGTCTTTGCGACTAAGATTGAATCTGTCGTGTCTAGTTCGACATTCCTTGAAGCCTATCAAGGTAAAATTGGCGGATTCACACTTGGACAATTTGACCAAGGTGGAGGTCGCTGGATTTCTGGCGTAAACCATTTCGCAGTTGGAATGGGAAATGGAGAAGGGCGAGGAACTAGAACCGCATTTTGGGCGAACTGGGGCGATAGCTGGAACACAATTGGAGATAGGGCGTGGTATGTGAATACAGATGGCAAAATGTACTGTAAGAACGATTCAATCTTTTACAGACAAGTCACGTTTGACACTAACTGTTCTGTAGATTGCTACGGGACACAGACCTTCTATAAATCGCCTGTCTTTATCCACGGGATCGAATTAGGCGAGGCAGATATTTACGGTAATGGCTCCAACCCGAAAGGTGGGAAGAATGCGGTAGTCTGGTGGAACCAAGTTGGAAGTGGAAGTGTGAAATACTGGGGAGATAAATCTTCAGATAGACGCTTGAAAGAAAATATCACAGACACATCTGTAAAAGCCTTGGACAAAATCAACAGACTAAATATGGTCGCATTTGACTTTATCGAAAGCAAGAAACACGAGGAAATCGGTTTGATTGCTCAAGAGGCTGAGACCATCATTCCAGAAGTTATCTCACGAGACCCTGACAATCCAGACGGCTATCTGCACATCGACTATACTGCTTTCGTACCCTATTTGCTGAAAGCTGTCCAAGAACTGGACCAGAAAATTAAAGAAATGGAGAAACTACATGGATAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0098015 virus tail Cellular Component IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
2f274b221f5d5ba8bb8b8aebc1b2722bb432095ee9520aed546a8f7d94078fbb
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7693
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50