Protein

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Genbank accession
WQY99909.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MDDSGMPIMVLPESGSAADVLIELAKPTGAGLIGSLSGKSVQQELMIKTSSFTSLQDAANYAVNGIIVDEDYYFTDGETVDFGGKDLTIDCKAKFIGDGKLTFENLGSGSRIVHPHMQSQTVPYVISRWDSNGDWINDPSTIISTLTQSRTQGYAPTTNDVDIYSYLPDNVKNQNVISHLIISNSSGIDIFYPKATFGSYESFKNNNVKFWYPRDFYGDMTNCIAFTAWDSTDYYHGNYVIGGSTNYGSGSGVCFYRNDGGVSRDGGVIGGFTPYRCGESGVKTYQNEVNGISQRCYSLRFIDIYPIETYYDGVDLNADYGTPTERQHDYTLAQYGWNNLPTNHLVSNIQAHKTHGVGIWGDGSTGFYLDIYASYSRGVGIFIKGSGKTFKNLTSVQNNAANTPGENQITLDGANIIDGVNIINYTQPPGLAIFAPNSTVTNLSAPGVSSSSINIGNIEGLVVGNQISVQPNLATQTSAVYLNVVNTGVASKREDTTKVGPGASEVTRYVISGSAPRLTMRENHGDFGAVNIAFSGTVLPDEAVPDANSYAVYWDGTNLTALINHGGVLTRQKLTT
Physico‐chemical
properties
protein length:576 AA
molecular weight: 62126,96590 Da
isoelectric point:4,81986
aromaticity:0,10417
hydropathy:-0,25920

Domains

Domains [InterPro]
IPR012332
STR
41–576
IPR012332
IPR011050
STR
47–573
IPR011050
IPR015331
RBD
47–574
IPR015331
IPR012332
STR
50–576
IPR012332
WQY99909.1
1 576
Architecture
STR
STR 41-576
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WQY99909.1
1 576
Domain Start End Length (AA) Confidence
N-terminal 1 54 54 0,9816
Central domain 55 468 415 0,9916
C-terminal 469 576 107 0,8883
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-54
Central
55-468
C-terminal
469-576

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage VB_ST_SPNIS2
[NCBI] 		3097437 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WQY99909.1 [NCBI]
Genbank nucleotide accession
OR757456.1 [NCBI]
CDS location
range 20550 -> 22280
strand +
CDS
ATGGATGATAGTGGCATGCCGATAATGGTTCTTCCAGAATCAGGATCCGCAGCAGATGTATTAATAGAGCTTGCTAAGCCTACCGGGGCGGGGTTGATAGGATCCCTATCAGGAAAATCAGTTCAGCAAGAACTGATGATTAAAACATCTTCATTTACATCACTGCAAGATGCAGCTAACTACGCAGTGAATGGAATAATTGTTGATGAGGATTATTATTTTACTGACGGCGAGACGGTTGATTTTGGAGGAAAGGATTTAACTATCGACTGTAAAGCTAAGTTTATCGGGGATGGTAAATTAACATTTGAAAATTTAGGCTCAGGATCACGCATTGTGCATCCACATATGCAGTCACAAACGGTACCTTATGTTATATCAAGATGGGACAGTAACGGTGATTGGATAAATGACCCATCCACTATCATTTCCACTCTTACTCAAAGCAGAACGCAAGGTTACGCACCTACAACTAATGATGTAGACATATATAGCTATCTACCAGATAATGTTAAAAACCAAAATGTAATATCACATCTCATTATATCTAATTCATCAGGGATAGATATATTTTATCCAAAAGCAACATTTGGATCATATGAATCATTTAAAAATAACAATGTGAAGTTTTGGTATCCACGTGATTTTTATGGAGACATGACAAACTGCATCGCATTTACTGCATGGGATAGCACCGATTACTATCATGGTAATTATGTGATCGGAGGTTCAACTAATTATGGCTCTGGAAGTGGGGTGTGTTTTTATCGAAATGATGGAGGGGTTAGCCGTGATGGAGGTGTCATTGGTGGATTTACCCCTTACAGATGCGGTGAGTCAGGTGTTAAAACATATCAAAACGAAGTGAACGGAATAAGTCAAAGGTGTTATAGTCTTCGTTTTATCGATATCTATCCGATAGAAACGTACTATGATGGTGTAGATCTGAATGCTGACTATGGCACGCCAACTGAACGCCAGCATGATTACACATTGGCGCAATACGGCTGGAACAACCTTCCAACAAACCACCTCGTTAGCAACATTCAAGCGCATAAGACTCATGGTGTTGGTATTTGGGGGGACGGATCTACAGGGTTTTATCTAGATATCTATGCATCATATTCTCGGGGCGTAGGTATATTTATCAAAGGAAGTGGGAAGACTTTTAAAAACCTAACTTCCGTTCAAAACAATGCAGCTAACACGCCAGGAGAAAACCAGATTACACTTGACGGGGCAAACATAATCGATGGTGTAAATATAATAAATTACACACAACCACCAGGACTTGCTATTTTCGCTCCAAATTCTACAGTCACCAATCTTAGCGCCCCGGGCGTTTCGTCATCATCCATAAACATTGGCAATATTGAGGGTCTGGTGGTTGGTAACCAGATAAGCGTACAGCCAAATCTTGCAACGCAAACTTCAGCTGTATACTTAAATGTAGTCAATACTGGTGTGGCCTCTAAAAGAGAGGATACCACAAAGGTTGGTCCAGGAGCGTCAGAGGTTACCAGATACGTAATTTCAGGTAGTGCACCAAGGTTAACCATGAGAGAAAACCATGGAGATTTTGGGGCGGTAAATATTGCATTCTCTGGGACGGTCCTGCCAGACGAGGCCGTACCGGATGCAAACTCCTACGCTGTATATTGGGATGGAACTAACCTTACTGCTTTGATAAATCACGGTGGTGTTCTTACAAGACAGAAGTTAACAACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2b2f07c2b5adbae7dfbe8363fd82f070c24ad7ec46e57eb130f4123310d0bcca
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6510
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50