Protein
View in Explore- Genbank accession
- WMU95945.1 [GenBank]
- Protein name
- long tail fiber
- RBP type
-
TFTSP
- Protein sequence
-
MEKFMAEFGQGYVQTPVISENNAVKFKMSIAGSCTLSTVKSYIKFQDERIGPTTFGNGLTLLEIDTTTNKIVNTKNYSLTSTHDAISQALITFVESVPAGRLIAFISSGKLNASQTLIDWFRKCGSRAFPEKWLIDKVDTSYSAFYITGRNVIVSEHVKYNDGKLVEDVSTPLEVVYDTFSDIGATGYPVRITEDESTYSSTGDGTPTTIKRFPTEDLVTPMDTYNLLPLDVLYLKFQMSFDAALKAAGTVRTSIRFFKSPSTAPISNTNIDIAANVPAGAWASFERYVEIPAGADGFTVVTSRTVAVGTGSIRNIVIGEITRGDSAFKPAEFGVNGIRMSYANDTTNTGNTIVTFPDAQAPRAGKIYAAELREKQ
- Physico‐chemical
properties -
protein length: 376 AA molecular weight: 40962,74580 Da isoelectric point: 5,45946 aromaticity: 0,10106 hydropathy: -0,11596
Domains
Domains [InterPro]
DC_0912
STR
1–376
STR
1–376
PS52031
LEC
22–192
LEC
22–192
IPR039477
STR
57–128
STR
57–128
1
376
Architecture
STR 1-376
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
376
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 58 | 58 | 0,5159 |
| Central domain | 59 | 257 | 200 | 0,2487 |
| C-terminal | 258 | 376 | 118 | 0,9794 |
Note: Constraints were applied during segmentation.
Fixed 33 C-terminal predictions appearing before Central domain
Fixed 33 C-terminal predictions appearing before Central domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-58
1-58
Central
59-257
59-257
C-terminal
258-376
258-376
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Escherichia phage pEC-M719-6WT.2 [NCBI] |
3056221 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
WMU95945.1
[NCBI]
Genbank nucleotide accession
OQ845958.1
[NCBI]
CDS location
range 166936 -> 168066
strand -
strand -
CDS
ATGGAAAAATTTATGGCAGAGTTTGGACAAGGATACGTCCAAACGCCAGTTATATCAGAAAATAATGCCGTTAAATTTAAAATGAGTATAGCAGGGAGCTGTACTCTTTCCACGGTGAAATCGTATATCAAATTTCAGGATGAACGAATTGGACCAACTACTTTTGGTAATGGTCTGACTCTATTGGAAATTGATACAACTACGAATAAAATTGTTAACACGAAAAACTATTCATTAACTAGCACACATGATGCAATCAGTCAGGCATTAATCACCTTTGTGGAATCTGTTCCAGCCGGAAGATTGATTGCTTTTATTTCTTCAGGGAAACTAAACGCATCACAGACATTAATTGATTGGTTCCGTAAATGTGGTTCAAGAGCATTCCCAGAGAAATGGCTGATTGATAAAGTTGATACATCGTACTCGGCTTTTTACATAACCGGCCGGAATGTAATTGTTTCGGAGCATGTTAAGTATAATGACGGGAAGTTAGTTGAGGATGTTTCGACTCCGCTTGAAGTCGTTTATGATACCTTTAGTGATATAGGAGCAACAGGCTATCCTGTGCGCATAACGGAAGACGAGAGCACGTATTCATCAACAGGTGATGGAACACCAACCACAATTAAAAGGTTCCCCACAGAGGACCTGGTGACTCCTATGGACACCTATAACCTTTTACCTTTGGATGTGCTTTACTTGAAGTTTCAGATGTCATTTGACGCTGCACTGAAAGCCGCGGGGACCGTAAGGACTTCGATTCGATTCTTTAAAAGTCCTAGCACTGCTCCAATATCAAATACGAACATCGATATTGCAGCAAACGTTCCAGCTGGTGCATGGGCGAGTTTCGAAAGATATGTTGAGATTCCGGCGGGAGCCGATGGCTTTACAGTAGTAACATCAAGGACTGTAGCTGTGGGAACTGGGTCAATACGTAATATTGTTATTGGTGAGATAACCAGAGGTGACTCGGCATTCAAACCAGCTGAATTTGGTGTCAACGGCATAAGGATGTCATATGCAAACGATACAACAAATACAGGCAATACAATTGTAACATTCCCGGATGCGCAAGCTCCGAGAGCCGGCAAGATATATGCAGCCGAACTACGAGAAAAACAATAG
Genome Context
Genome Context
Tertiary structure
PDB ID
999ba622526b755990e89dd68f66e858daf98501f6397895e126d8dec73446bd
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50