Protein

View in Explore
Genbank accession
XAG93794.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MYSPRPYGRFAEDAELSADDAAAVERLARNLTNFKQASELASLKRVADLPSGRQAVAIDMGGVFRILVLEQHELPQFRFDGVAQTNIPMLFSGVITRAQVLTDGQGVGIRLTEQARRRLVAYDPKAALPPKDVALQRFVIKYEPRFQYFEPREQGIYTFTQYVKQRPTWYSGAMAEVMQVAGGYGRQVMAELPEDDLERARMLIPERYMHRIRQEVGNVRLPAYTGFPDEQGQFKCDYLASRCNAVAFDAGNSPWLLQINARGVYAMPLPVVPATTTEAFRDYVLDVGDDELLKLLDRFGGMPTGEGFPQPEQEFEAWRRAGVIVKVCDTADFYNFEAMYVACGWAVNSRGTEGFNTCWTYDDAGLMQVHAYKMSLSLAPAENQGRLKNTWNFDDPDDAAKLNAYLAQVYGALTDGSARELAIKYKIRRVPAGEILSRASSASGPDLDYWDSLELPPIATHQGRVSRVASGPFYWPSKVLKSCTRLKFPELTGLGCESFPHISPDYSGGAVKCDTIVFGCYVEDQLRVIKYFYDERKFQQETTSTFEQYMIVGQWEKTETFGLSGLMGFFYTTDFDDRQEQPAVTVHTNIVGTDMGYGNPAYSTPPTLWCVGGVSRSRYYMHRTTVDTTETFTLDVAALVPVFERDCMLYAYQDHTGGRSSHEETTQGSVPDPTSYELWCYDDIWHWMGQTRNGNRGDPPSKDGVPVYVDTLVYSPTEISDFAESGNWLNLPPGGFLDVTGICGPYTYRNSVHNANGVIIGGEAPGFDPYRKDTQYPNESSGRLSVCLSVAGAVQVNKDMPHSWYWGFSPENDFYFYRDAVHVAIGDARYASIYETGQDGLRRRWGHTALADHKAAHHFIGVINE
Physico‐chemical
properties
protein length:865 AA
molecular weight: 97062,76460 Da
isoelectric point:5,17476
aromaticity:0,12254
hydropathy:-0,38555

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAG93794.1
1 865
Domain Start End Length (AA) Confidence
N-terminal 1 146 146 0,9047
Central domain 147 402 257 0,7155
C-terminal 403 865 462 0,4121
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-146
Central
147-402
C-terminal
403-865

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeP-F1Pa
[NCBI] 		3143136 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAG93794.1 [NCBI]
Genbank nucleotide accession
PP735386 [NCBI]
CDS location
range 26204 -> 28801
strand -
CDS
ATGTATTCGCCGCGCCCCTACGGACGTTTCGCGGAAGACGCGGAACTCTCCGCCGACGATGCCGCCGCTGTCGAGCGGCTGGCCAGGAACCTGACGAACTTCAAGCAGGCGTCTGAGCTGGCCAGCCTGAAGCGCGTTGCGGATCTGCCCAGCGGTCGGCAGGCGGTGGCCATCGACATGGGCGGGGTGTTTCGCATCCTGGTGCTCGAGCAGCATGAGCTTCCGCAATTCCGTTTCGACGGTGTGGCACAGACCAACATCCCCATGCTGTTCTCCGGCGTCATCACCCGCGCCCAGGTGCTGACCGATGGGCAGGGCGTTGGCATAAGGTTGACCGAGCAGGCCCGGCGCCGGCTGGTGGCCTACGACCCGAAAGCGGCGCTTCCGCCGAAGGACGTGGCGTTGCAACGCTTTGTCATCAAGTACGAACCGCGTTTCCAATACTTCGAGCCGCGCGAGCAGGGCATCTACACCTTCACTCAGTACGTCAAGCAGCGCCCGACCTGGTACAGCGGCGCCATGGCCGAGGTCATGCAGGTAGCTGGCGGATATGGGCGGCAGGTCATGGCCGAACTGCCAGAGGACGACCTTGAGCGCGCAAGGATGCTGATTCCTGAGCGCTACATGCACCGCATCCGCCAGGAAGTCGGCAACGTTCGGCTGCCGGCCTACACAGGCTTTCCGGACGAGCAAGGCCAGTTCAAATGTGACTACCTCGCCAGCCGCTGCAACGCCGTCGCTTTCGATGCCGGCAACAGTCCGTGGTTGCTGCAGATCAATGCGCGGGGCGTCTACGCGATGCCGCTTCCTGTGGTGCCGGCCACCACCACCGAGGCTTTCCGTGACTACGTGCTGGATGTTGGTGACGACGAGCTGCTGAAGCTTCTGGACCGCTTCGGCGGCATGCCTACTGGTGAGGGGTTCCCACAGCCGGAACAGGAGTTCGAGGCGTGGCGCCGGGCCGGCGTCATCGTCAAGGTCTGCGACACCGCCGACTTCTACAATTTCGAGGCCATGTACGTGGCGTGTGGCTGGGCGGTGAACAGCCGAGGCACCGAGGGCTTCAACACCTGCTGGACCTATGACGACGCCGGCCTGATGCAGGTCCATGCGTACAAGATGAGTCTGTCGCTGGCCCCGGCGGAGAACCAGGGGCGACTGAAGAACACCTGGAATTTCGATGATCCAGACGATGCAGCGAAACTCAACGCCTACCTGGCCCAGGTCTATGGCGCGCTGACCGATGGCTCCGCCAGAGAACTGGCCATCAAGTATAAGATTCGGCGGGTGCCGGCTGGTGAGATTCTCTCGCGCGCCTCTTCGGCCAGCGGCCCGGATCTGGACTACTGGGACAGCCTGGAACTACCTCCCATCGCCACCCACCAGGGCCGCGTGTCGCGCGTCGCCAGTGGCCCTTTCTACTGGCCGTCCAAGGTCTTGAAGTCCTGCACCCGCCTGAAGTTCCCCGAACTGACGGGGCTGGGGTGCGAGTCCTTCCCGCACATCTCGCCCGACTATTCCGGCGGCGCAGTGAAGTGCGACACCATAGTCTTCGGCTGCTATGTCGAGGACCAATTGCGTGTCATCAAGTATTTCTACGACGAACGCAAGTTCCAGCAGGAAACGACAAGTACGTTCGAGCAGTACATGATCGTCGGCCAGTGGGAGAAGACCGAGACCTTCGGCCTTAGCGGGCTGATGGGGTTCTTCTACACGACCGACTTCGACGATCGGCAGGAGCAGCCGGCGGTAACGGTCCATACCAACATCGTTGGCACCGACATGGGCTACGGCAACCCGGCTTACTCCACTCCGCCGACACTTTGGTGCGTCGGCGGCGTGAGCCGGTCCAGGTATTACATGCACCGCACCACGGTAGACACTACCGAGACGTTTACCCTGGACGTGGCGGCGCTGGTGCCGGTGTTCGAGCGCGATTGCATGCTCTACGCCTACCAGGACCATACCGGGGGACGCAGTTCCCACGAGGAAACGACGCAGGGCTCTGTGCCTGATCCCACGTCCTACGAACTCTGGTGCTACGACGACATCTGGCACTGGATGGGGCAGACGCGGAACGGGAACCGGGGTGACCCGCCATCCAAGGATGGGGTGCCGGTCTATGTCGACACGCTGGTCTACAGCCCAACCGAAATCAGCGACTTCGCCGAAAGCGGCAACTGGCTGAACCTGCCACCTGGCGGTTTTTTGGATGTCACGGGCATCTGTGGGCCGTACACCTACCGCAACTCCGTCCACAACGCCAACGGCGTCATTATCGGCGGCGAGGCGCCAGGCTTCGATCCGTACCGGAAGGACACCCAGTACCCCAACGAGAGTAGCGGGCGCCTGAGTGTGTGCCTGTCCGTGGCCGGCGCTGTTCAGGTCAATAAGGACATGCCGCACTCGTGGTACTGGGGCTTCTCGCCCGAGAACGACTTTTACTTCTACCGCGACGCCGTGCATGTCGCCATCGGCGACGCCCGGTACGCCAGCATCTACGAGACGGGCCAGGATGGACTGCGCCGCCGCTGGGGGCATACCGCGCTCGCCGATCACAAGGCGGCCCACCACTTCATAGGGGTTATCAATGAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
403607ae906d2ccd266a4d532064bf0613c9cb83dded40636761701277aa177e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3012
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage suitable for treating a bacterial infection caused by Pseudomonas aeruginosa Santamaria-Corral,G., Aguilera-Correa,J.J., Esteban,J. and Garcia-Quintanilla,M. 2023-06-22 — GenBank