Protein

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Genbank accession
YP_010673548.1 [GenBank]
Protein name
membrane protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYGIWCQPVGPGPAAPASLFIDSNLTFPQYLGAYSISPSWSARNASFNVGSFDGQGELLIVPTSRLIQDYYVGTDLMPSFSYVTGIGTSGQTVNINIEPAGASGNNNRNFPMSFQAYKLWPRGNRSYGITFSNSADFFSISDSGVVGQCVWAYRGAVGDGFTVPNAGPNALVFANWNQGGVCASYNASNGQMIITHNRSNQSGSNRGAVINDMRIAVFASGVGVPEHNGGLNIYSPGTTTCVFSTYRTPFAISRFFPSSGGGTGLGIPMMCMNVTNGAITAQGGGWMWVHERSHTMSGTSVGTGFGPLVANWTDQYPINVNINLGFNYPMLEGSLIYA
Physico‐chemical
properties
protein length:339 AA
molecular weight: 35939,78650 Da
isoelectric point:6,39248
aromaticity:0,12389
hydropathy:-0,01947

Domains

Domains [InterPro]
DC_1434
ATT
1–40
DC_1434
IPR045604
STR
28–314
IPR045604
YP_010673548.1
1 339
Architecture
ATT
STR
ATT 1-40 | STR 41-314 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010673548.1
1 339
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0042
Central domain 11 209 200 0,0025
C-terminal 210 339 129 0,9982
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-339

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoP_EcoN5
[NCBI] 		2686238 Uroviricota > Caudoviricetes > Mktvariviridae > Kuravirus > Kuravirus EcoN5
Host Escherichia coli ATCC 25922
[NCBI] 		1322345 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010673548.1 [NCBI]
Genbank nucleotide accession
NC_070986 [NCBI]
CDS location
range 16525 -> 17544
strand +
CDS
ATGGCATATGGAATATGGTGTCAACCAGTAGGTCCGGGGCCGGCTGCCCCTGCCTCTCTTTTTATAGATAGTAATCTAACATTTCCACAATACCTAGGGGCATACAGTATATCCCCTTCGTGGAGTGCTAGAAATGCTTCATTTAACGTTGGCTCTTTTGATGGTCAAGGTGAGTTGTTAATTGTCCCAACCAGTAGACTTATTCAAGATTATTATGTAGGTACAGATTTAATGCCTAGTTTTAGTTATGTAACAGGTATAGGAACTTCTGGACAAACAGTAAACATCAATATAGAACCTGCTGGGGCTAGTGGTAATAACAACAGAAATTTCCCAATGTCATTCCAAGCATATAAACTCTGGCCTAGAGGTAATAGAAGTTATGGAATAACTTTCTCCAATTCAGCGGATTTCTTTTCTATCTCTGATAGTGGGGTTGTTGGTCAGTGTGTTTGGGCGTACAGAGGGGCTGTAGGGGATGGTTTTACTGTTCCTAATGCTGGGCCTAATGCTCTTGTGTTTGCCAATTGGAATCAGGGTGGGGTGTGTGCTTCTTACAATGCAAGTAATGGTCAAATGATTATAACCCACAATAGGTCGAATCAGTCCGGCAGTAACAGAGGTGCAGTAATAAATGATATGAGAATTGCTGTTTTTGCTAGTGGGGTAGGTGTACCGGAACATAATGGAGGTTTGAATATTTATTCTCCTGGGACAACCACTTGTGTATTCTCTACTTACAGGACTCCTTTTGCTATCAGTAGGTTCTTCCCGTCAAGTGGGGGTGGTACAGGTCTAGGTATTCCTATGATGTGTATGAACGTTACCAACGGAGCTATAACAGCGCAAGGTGGTGGGTGGATGTGGGTTCACGAAAGATCTCATACAATGAGTGGTACATCGGTGGGAACAGGCTTTGGCCCACTCGTGGCTAACTGGACTGACCAATACCCAATCAATGTTAACATAAACCTAGGATTCAATTACCCAATGTTGGAAGGTTCTTTAATTTATGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a546fb6a57a8ca9444a49a12e518c7bf176768c444106a6c8eb5117a11fee25a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8060
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50