Protein

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Genbank accession
WMM94964.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence RBPdetect2
Probability 0,77
Protein sequence
MGGVISQSIPNFLNGISQQTPTQRGINQGQEQVNLQNNIVDGLSKRPPFEYISTIDSTNVYPNTTKFWSIQRDVNNQFIVAFYNGGVKVWDLNGNEQTVTIASGSSYLTSTNPKEDFRLVNIADYTYIANKSVTVLADTTTSASKIEEFYVPVVSSNYGRTFSIEVQHPSMSYGIKSQLDMPTGSNLTHDASFRDTANIADILFRGTSSSAWDGSSSASFKLTRTDTGATLSTTQGLGTYSGVTNYFTMTLYPSVIRGLVTDGNSNYTLETSDGSGNKSMYSVRDTISDFTKLPYHAHPDSKIKVIGEDGDTLSDYWVQWQSDGLWQETIAPDVSLGLDNSTMPHALINNNDGTFTFQQLNWDDRTCGDGITNPNPSFVNNKINNLLFYKNRLGVLARDNLILTGNAEFFNFFSKTVTQVLDTDPIDVAASGSEVNTLFDSVAFNEALLLFSEKAQYRLGNVGQSLTPTTAVLNEVSAFEFNQAVKPVSAGKYAYFAQARNNNTAIREYFADDDTLTNDGLDITVSVQNLLPANVYQLISNTTEDTLVALAADTADTQVAPYTTGTDITSTNGGTMYIYKYFFDRGEKVQTAWSKWTITNGKILGGLSFESIIYLMVVEGTDTKLIKIDLRNLKDTTIGFNIYLDLKTSVTGTYNSTTDLTTFTSPYGAKTGLLAVDKTNGNNYTATNTSGSTYTIEGDHTSLFIGIPYESKYTLSEQYVRESSGRGLVAVTSGRYQIRNISLNFENSGYFQVEVTPEGRNTSYTYMNGYIIGTSTSKVGVPAISSGTIKVPVSCRNTDFTFDIKSSSHLPMYIASAEVEGYYHNRSRRI
Physico‐chemical
properties
protein length:830 AA
molecular weight: 91186,81050 Da
isoelectric point:4,85493
aromaticity:0,10843
hydropathy:-0,31398

Domains

Domains [InterPro]
IPR058003
TTP
4–830
IPR058003
WMM94964.1
1 830
Architecture
TTP
TTP 4-830
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WMM94964.1
1 830
Domain Start End Length (AA) Confidence
N-terminal 1 136 136 0,9757
Central domain 137 356 221 0,6108
C-terminal 357 830 473 0,3224
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-136
Central
137-356
C-terminal
357-830

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC168P
[NCBI] 		3072838 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp. HTCC7211
[NCBI] 		439493 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WMM94964.1 [NCBI]
Genbank nucleotide accession
OR420735 [NCBI]
CDS location
range 19907 -> 22399
strand +
CDS
ATGGGTGGTGTAATATCACAGAGTATTCCTAATTTTCTGAATGGTATCTCACAACAAACACCTACACAAAGAGGTATTAATCAAGGTCAGGAACAGGTAAATTTACAAAACAATATTGTAGATGGATTATCTAAAAGACCACCTTTTGAATACATATCTACAATAGATAGTACAAATGTATATCCTAACACAACTAAATTTTGGTCTATACAAAGAGATGTTAATAATCAATTTATTGTTGCTTTTTACAATGGTGGTGTTAAAGTATGGGATTTAAATGGTAATGAACAAACTGTAACAATAGCGAGTGGTTCATCTTATCTAACATCAACAAATCCTAAAGAAGATTTTAGATTAGTTAATATTGCAGATTATACATATATTGCAAATAAATCAGTAACAGTATTAGCAGATACTACAACAAGTGCGTCTAAGATAGAAGAGTTTTATGTGCCGGTAGTATCAAGTAATTATGGTAGAACTTTTTCTATAGAAGTACAACATCCTAGTATGTCGTATGGTATTAAATCTCAATTAGATATGCCTACAGGTTCTAACTTAACACATGATGCATCTTTTAGAGATACTGCAAATATTGCAGATATATTATTTAGAGGTACTTCTAGCTCAGCATGGGATGGCTCATCATCAGCTTCTTTTAAATTAACAAGAACAGATACAGGTGCAACACTAAGTACAACACAAGGACTAGGTACATATTCTGGTGTTACAAATTATTTTACAATGACTTTATATCCTTCTGTTATTAGAGGTTTAGTTACAGATGGTAATTCTAATTATACTTTAGAAACAAGTGATGGTTCTGGTAATAAATCTATGTATTCCGTAAGAGATACTATAAGTGATTTTACAAAGTTACCTTATCATGCACATCCTGATAGTAAAATAAAAGTAATAGGTGAAGATGGAGATACATTGTCAGACTATTGGGTACAATGGCAATCAGACGGTTTATGGCAAGAAACAATTGCACCTGATGTAAGTTTAGGATTAGATAATTCTACAATGCCACATGCATTAATAAACAACAATGATGGTACATTTACATTTCAACAATTAAACTGGGATGACAGAACTTGTGGAGATGGTATTACAAACCCTAATCCTAGTTTTGTAAACAATAAAATTAATAACTTATTATTTTATAAAAATAGATTAGGTGTATTAGCCAGAGATAATTTAATACTTACAGGTAACGCAGAGTTTTTCAATTTCTTTTCTAAGACAGTAACACAAGTTTTAGATACAGACCCTATAGATGTAGCGGCGTCTGGTTCAGAAGTTAATACATTGTTTGACAGTGTAGCATTTAATGAAGCATTACTATTGTTCTCAGAAAAAGCACAATATAGATTAGGTAACGTTGGTCAATCATTAACACCTACTACTGCTGTATTAAATGAAGTATCAGCATTTGAATTTAACCAAGCTGTAAAACCTGTATCAGCAGGTAAGTATGCATATTTTGCGCAAGCTAGAAATAACAACACAGCAATAAGAGAATATTTTGCTGATGATGATACACTTACAAATGATGGTTTAGATATAACAGTATCAGTACAAAATTTATTACCGGCTAATGTATATCAGTTAATTAGTAATACTACTGAAGATACACTTGTTGCATTAGCGGCAGACACAGCAGATACACAAGTTGCACCATATACTACAGGTACAGATATAACATCTACTAATGGTGGAACTATGTACATCTATAAGTATTTCTTTGACAGAGGTGAGAAAGTACAAACAGCATGGTCTAAGTGGACTATAACTAATGGTAAAATATTAGGTGGTTTGTCTTTTGAAAGTATTATTTATTTAATGGTTGTTGAAGGTACAGATACAAAATTAATTAAAATAGATTTAAGAAATTTAAAAGATACTACAATTGGTTTTAATATTTATTTAGATTTAAAAACAAGTGTTACAGGCACATATAATAGCACAACAGACTTAACTACATTTACATCACCTTATGGTGCAAAAACAGGATTATTAGCTGTAGATAAAACTAACGGAAATAATTACACAGCTACAAATACAAGTGGTTCTACATATACAATAGAAGGTGACCACACTTCATTGTTTATTGGTATACCTTATGAAAGTAAATACACTTTATCAGAACAATATGTAAGAGAAAGCTCAGGTAGAGGATTAGTAGCAGTTACTTCAGGTCGTTATCAAATTAGAAACATATCATTAAATTTTGAAAACTCAGGATACTTTCAAGTAGAGGTAACACCAGAAGGTAGAAACACAAGTTACACATACATGAATGGATATATTATAGGAACATCTACAAGTAAAGTTGGCGTACCTGCAATTAGCTCAGGTACTATTAAGGTACCCGTTTCATGTAGAAATACAGATTTTACATTTGATATTAAGAGCTCTTCACATTTACCAATGTATATTGCTAGTGCAGAAGTAGAAGGATATTATCACAATCGTTCAAGAAGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dcc2a75bc054d02b9e46f362aaa48c441986202749d625d53ecfeca6d2ce5306
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2915
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50