Protein

View in Explore
Genbank accession
AKZ65595.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSKSSYIGANVEVDSDTFTSFINKVNAVIADMSSTVVTAAPVAQANSTNGASTSGNAHVEGVLSAGVLVAPELRGGTMSVPATMVISTNTNPKANTSVSLGTDTARYTNVFMTNANTRNLFANTSQTYNLTVLTAANVNALDANTADITTLTSNSATITTIVNDTLTSNSATITTLSSNTFTSNSATIATANVGALTANTATVKTGTVTTLTSNSATITTLTSNTITVNTDLTVNRNLSIANNISANSLNVTKDVFIAGNLVVQGVTSLASDQALSVNTSIAEFLTVQQVALFNGNTTIGNAATDSLTITAKVASNIIPSGNTYSLGNTTNKFATAHITSMESPTFTSVMNQTGAAPHYQLEETDTNTVGRVIVSGGQLYIQAGAANTGATSTSGVIRFAGFNNVDVGTFAVRANGNWQAIYHQGNDGDGSGLDADLFEGQHGTYYLDAANFTGTLADARLPSSMTGKTFTSNTEITGMLTINHATSAEVRLEMNGVLSGRVYRDAGGGLVMRRYNSTTGAAEGYIQITGNGADDLKYNGSTIWHDGNAALSIANVTGMSGAIMWFARNSAPSGFLKANGAAVSRTTYAALYAAIGTTFGAGDGSTTFNLPDLRGEFIRGWDDGRGIDVSRVFGSAQSANIQSHTHSIDPPATTTTSDAHTHTWSGTTSSDAHTHTFSGTTNTTGAHTHTVTSILVSGAGSGAIGGSNRDVADKTTSSAGDHAHTFSGTTSSDSHTHTVSGTTSSDTHNHTVDIAAFTSGAAGSGTDTRPRNIALLACIKY
Physico‐chemical
properties
protein length:781 AA
molecular weight: 80084,59840 Da
isoelectric point:5,57849
aromaticity:0,05890
hydropathy:-0,09603

Domains

Domains [InterPro]
DC_1600
STR
236–522
DC_1600 IPR037053 DC_1872
DC_0310
STR
445–712
DC_0310
SSF88874
STR
559–693
SSF88874 SSF88874
IPR011083
ATT
561–618
IPR011083
AKZ65595.1
1 781
Architecture
STR
ATT
STR
STR 236-550 | ATT 551-618 | STR 619-781
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AKZ65595.1
1 781
Domain Start End Length (AA) Confidence
N-terminal 1 179 179 0,3131
Central domain 180 378 200 0,2763
C-terminal 379 781 402 0,9687
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-179
Central
180-378
C-terminal
379-781

Taxonomy

  Name Taxonomy ID Lineage
Phage Sinorhizobium phage phiN3
[NCBI] 		1647405 Uroviricota > Caudoviricetes > Emdodecavirus >
Host Sinorhizobium meliloti
[NCBI] 		382 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
bed3498cca39d0beeb4242c65b2bb59a2cce67544e21f1f70e3a1dd7bac09d9f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6018
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50