Protein

View in Explore
Genbank accession
QPB10201.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,75
Protein sequence
MPVVFLTGFNGSAMTHANYGMPNLFISNSDPYNQLVVKSAENAVNLMWGNITANDMLAPRFCVIGRKWGNSSYNGYPSLTMGPSTTDPTAKCIAFYCNFGNPSDWRMGWGMYFAPLGFTASTSFRVGVRVFRNNTLTGAYPLLIGDMTTNAETTSRFTYNWEKGKEVYLEVEWYADTKTLNLYIDDELVQTTGPGFTTYVPTQGISFLAELYNSNTAINAIHSEYKDVYVQRIDSEADIRLGSATKVWPFFPNSDDEVEYLRPAGYNSNAAVAALPMNNNSNTPPMPNPTTAFLSATDIGQSDMYNTNATGIAAKLSTVEAVMIRTYALNPLTGTRQMTVKASLNGVVAESPLSTVPNDTSGFRLKSLIMTSDPNGTRWTPSTVSALKIGTQVKS
Physico‐chemical
properties
protein length:395 AA
molecular weight: 43230,17290 Da
isoelectric point:5,34817
aromaticity:0,11139
hydropathy:-0,21215

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPB10201.1
1 395
Domain Start End Length (AA) Confidence
N-terminal 1 44 44 0,0017
Central domain 45 243 200 0,3276
C-terminal 244 395 151 0,9547
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-44
Central
45-243
C-terminal
244-395

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaS-Smarc5
[NCBI] 		2777235 Viruses > unclassified bacterial viruses >
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPB10201.1 [NCBI]
Genbank nucleotide accession
MT980834 [NCBI]
CDS location
range 36899 -> 38086
strand +
CDS
ATGCCAGTAGTATTTTTAACCGGGTTCAACGGGTCAGCAATGACCCATGCCAACTACGGTATGCCGAATTTGTTCATTTCCAATAGTGACCCATACAACCAACTGGTCGTCAAATCAGCAGAGAACGCCGTCAACCTGATGTGGGGGAACATCACCGCGAATGATATGCTTGCCCCTCGATTCTGCGTGATCGGCCGGAAGTGGGGGAACTCGTCATATAACGGCTACCCATCATTGACAATGGGGCCATCCACAACTGACCCGACGGCTAAGTGCATCGCATTTTACTGCAACTTCGGCAACCCGAGTGACTGGCGAATGGGGTGGGGCATGTACTTCGCGCCACTTGGATTTACCGCCAGCACCTCTTTCCGTGTCGGGGTTCGCGTTTTCCGCAACAACACTTTGACCGGTGCGTACCCGCTTCTGATCGGAGACATGACGACCAACGCCGAAACCACGTCGCGCTTCACGTACAATTGGGAGAAAGGGAAGGAGGTCTATCTCGAAGTGGAATGGTACGCCGACACCAAGACCCTGAATCTGTACATCGATGATGAGCTGGTGCAAACGACAGGCCCGGGTTTCACCACATATGTACCGACCCAAGGTATCAGCTTCTTGGCCGAGCTTTACAACTCGAACACCGCGATTAACGCGATCCATTCCGAGTACAAGGACGTGTACGTTCAGCGGATCGACTCCGAGGCTGATATTCGGCTTGGGTCGGCGACGAAGGTGTGGCCGTTCTTCCCGAACAGCGATGACGAGGTGGAATATCTGCGCCCGGCCGGGTATAACTCCAACGCCGCCGTCGCCGCGCTGCCGATGAATAACAACTCGAACACGCCGCCGATGCCGAACCCGACAACCGCGTTCCTGTCAGCCACGGACATCGGCCAGTCGGATATGTACAACACCAATGCCACCGGCATCGCCGCCAAGTTGTCGACGGTTGAAGCGGTGATGATCCGCACCTACGCGCTTAACCCGCTCACCGGGACGCGCCAGATGACGGTGAAGGCATCGCTGAATGGCGTTGTGGCAGAATCGCCGTTGTCCACGGTGCCGAACGATACTTCCGGTTTCCGCCTAAAATCGCTGATCATGACGTCTGATCCGAACGGAACGCGCTGGACGCCTTCTACGGTGTCCGCCCTGAAAATCGGGACACAAGTAAAATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4f13348984b8e467eecf2a326cf955364cdc588472bd024dbddeabe46c463453
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5881
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50