Protein

View in Explore
Genbank accession
BHD21350.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MSLALKFGDVADPEALSGVIYFDAVTSYSRDFSGRVTSHPIEAGASITDHFISNNPVINFSCVVSNVDLTAMAGQVQIEGIAPMNASGQPTAVSISNVGGLLKEITPGVISQFFPKVLPTIVLDTNSKEDFGPAISKFLEEILTGLQFNDERKRWENRMVTATLYEIENGFPINPTENLVLTKFSKREDENTGDAFVADLTFEKVNFVTLEVAEAPKTQKGSKTSKKAGDTKNKGTVNSNPAPPEPEEDERLTVSGQVGRAGN
Physico‐chemical
properties
protein length:263 AA
molecular weight: 28346,45710 Da
isoelectric point:4,76825
aromaticity:0,07224
hydropathy:-0,25817

Domains

Domains [InterPro]
DC_0601
STR
4–262
DC_0601
IPR048494
ATT
22–215
IPR048494
BHD21350.1
1 263
Architecture
STR
ATT
STR
STR 4-21 | ATT 22-215 | STR 216-262 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Alcaligenes phage SRA-1
[NCBI] 		3459510 Viruses >
Host Alcaligenes faecalis
[NCBI] 		511 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BHD21350.1 [NCBI]
Genbank nucleotide accession
LC889977.1 [NCBI]
CDS location
range 66459 -> 67250
strand +
CDS
ATGTCTTTAGCTTTAAAATTTGGAGATGTAGCAGACCCTGAAGCACTGTCTGGGGTCATTTATTTTGATGCTGTGACTTCATATTCCAGAGACTTCAGTGGGAGAGTGACATCTCATCCCATTGAGGCTGGAGCCTCAATCACTGACCATTTCATATCGAATAACCCAGTGATTAATTTTTCATGTGTTGTATCTAATGTTGATCTTACTGCAATGGCAGGTCAAGTACAGATAGAAGGTATAGCACCAATGAACGCTTCAGGTCAGCCAACAGCAGTATCTATCAGTAATGTCGGTGGTCTGTTGAAAGAGATTACACCGGGAGTTATCTCACAATTCTTCCCAAAGGTTTTACCTACGATTGTATTAGATACTAACTCGAAAGAAGATTTTGGCCCAGCCATTTCTAAATTCCTTGAAGAAATTCTTACAGGATTACAATTCAATGATGAGAGAAAGCGGTGGGAGAATAGGATGGTTACAGCCACTCTTTATGAAATTGAGAATGGTTTCCCAATCAATCCTACAGAGAACCTAGTTCTTACAAAATTCTCTAAAAGAGAGGATGAGAACACAGGTGATGCTTTTGTTGCTGACCTTACTTTCGAGAAAGTTAACTTCGTGACTCTGGAAGTTGCTGAAGCCCCAAAAACCCAGAAGGGTTCAAAGACTTCTAAGAAGGCAGGAGATACAAAGAATAAAGGGACAGTGAATAGTAATCCAGCTCCACCAGAGCCGGAAGAAGATGAGAGATTGACAGTCTCAGGACAAGTTGGAAGGGCAGGTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ca4f2274b2800b642968f3d62db0c18d06b6d35398f07feb41ecdb2a41dde12c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7950
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of virulent bacteriophage of Alcaligenes faecalis Atyabi,S.R., Bouzari,M. and Soleimani-Delfan,A. 2014-10-09 — GenBank