Protein

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Genbank accession
WKV23286.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MLGIFTSLLSSRSFSIVDQNTNQLVAADLRISRVNTRFSSVGQRHMLEDGTTKMDSRTIHPMEIIVEVFCPSIDVVDQINQLFLDRDTLYKVITRGMVFERMMCTSEALNQTTDMISATPARLTFSQVLVQNPKPIMFRNAGDSSMIDRGLALAEDVVGSAGDLFDYAVNGVQNAADLF
Physico‐chemical
properties
protein length:179 AA
molecular weight: 19862,51940 Da
isoelectric point:4,80519
aromaticity:0,06704
hydropathy:0,06089

Domains

Domains [InterPro]
DC_0601
STR
1–178
DC_0601
IPR054442
ATT
4–132
IPR054442
WKV23286.1
1 179
Architecture
ATT
STR
ATT 1-132 | STR 133-178 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage APTC-PA18
[NCBI] 		3047163 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WKV23286.1 [NCBI]
Genbank nucleotide accession
OP957382.1 [NCBI]
CDS location
range 21876 -> 22415
strand +
CDS
ATGTTAGGGATTTTCACCAGCCTCCTAAGTTCGCGATCTTTTTCGATTGTGGACCAAAACACAAACCAGCTAGTTGCTGCGGATTTGAGGATAAGCCGGGTCAACACCCGGTTTTCTTCTGTAGGGCAACGCCACATGCTGGAAGATGGTACGACCAAGATGGATTCCAGAACGATCCACCCTATGGAAATCATCGTCGAAGTATTTTGCCCTTCAATTGATGTCGTCGATCAGATCAATCAATTGTTCCTGGATCGCGACACACTGTACAAAGTCATCACTCGCGGCATGGTATTCGAACGGATGATGTGTACCAGCGAAGCGCTCAATCAGACTACGGATATGATATCGGCGACTCCTGCGCGGCTGACATTCTCCCAAGTTCTCGTCCAGAATCCCAAGCCTATAATGTTCAGAAATGCAGGGGACTCTTCTATGATCGACCGAGGGCTGGCCCTAGCTGAAGACGTGGTTGGCTCGGCCGGCGATCTGTTCGACTACGCAGTGAACGGCGTCCAGAACGCCGCAGACTTGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c615530bcb3ab7ecdabd2f30479f88b2d8f3cdf3fdfd3b50b3f2f7bb4fb56c61
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8108
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage in combination with ciprofloxacin against Pseudomonas aeruginosa infections in diabetic foot ulcer patients Liu,S., Bouras,G., Goonetilleke,S., Hon,K., Burdon,I.A., Psaltis,A.J., Wormald,P.-J., Fitridge,R. and Vreugde,S. 2023-10-04 — GenBank