Protein

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Genbank accession
YP_009949114.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,67
Protein sequence
MPLYTQSIKNLKGGISQQPDILRFQDQGAAQVNGWSSESDGLQKRPPTVWVKRLTNTLPDNCKFHLINRDEFEQYYAVFTGTGLRVFDLKGVEQTVTGDMSYVQSSKPREDFRISTVADYTFVVNRNTVVTKGTTTSHPGYNSKTRALINLRGGQYGRTLRITINGGKQTMYKLPNGSNAETDPPLVDAQNIGAKLVELLTADYPTGWSFTLGSGYIVITSTTGAEITSVETEDGYANQLINAVLDTVQTVAKLPLAAPDGYIIRIQGETNSSADEYFVRYDASKKIWRETIQPGQVLGFNAATMPHALVRQADGTFSFQTLNWSERGAGNDDTNPMPSFVDNKINDVFFYRNRLGFLSGENFILSRSAGYFAFFPKSVATLSDDDPIDLAVSHPRISILKYAVPFAEQLLLWSDEVQFVVTSSGVLTAKSIQLDTSSEFSVSDDAKPYTIGRSVFFSAPRGSFTSINRYFAVADVTDVKDADDTTGHVLSYIPNGVFDTQGSGTENFISVLTSGAPNKLFIYKFLFKDGVQLQASWSHWEFAEGSRILAASTIGSTVYIVRKHAYGVDLETLTFIKESVDIFGEPYRIHVDGKTSMVISHNIYDENQNTSMVDIGPAYGSVPPPAGQYIMVDIAGNYVYLPETDWTKTTVVTLSGNWAGRTVFIGRVFKFTYQFSRFLIKHEDQNGTVTEDSGRLQLRRAWVNYQDTGALTMKVINRYREFLNTLNGVKLGEQMVGRVNIGDGQYRFPMNGDATQTTLILESDYPTPVSIVGCGWEASYARKAASI
Physico‐chemical
properties
protein length:787 AA
molecular weight: 87163,73500 Da
isoelectric point:5,56160
aromaticity:0,11309
hydropathy:-0,24917

Domains

Domains [InterPro]
IPR058003
TTP
1–786
IPR058003
YP_009949114.1
1 787
Architecture
TTP
TTP 1-786 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009949114.1
1 787
Domain Start End Length (AA) Confidence
N-terminal 1 135 135 0,9694
Central domain 136 345 211 0,1401
C-terminal 346 787 441 0,1852
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-135
Central
136-345
C-terminal
346-787

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage EcpYZU01
[NCBI] 		2483604 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterobacter cloacae
[NCBI] 		550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009949114.1 [NCBI]
Genbank nucleotide accession
NC_048135 [NCBI]
CDS location
range 3896 -> 6259
strand +
CDS
ATGCCACTTTATACTCAAAGCATTAAGAACCTGAAGGGTGGCATTAGCCAACAGCCTGACATCCTCCGGTTCCAAGACCAAGGGGCTGCGCAGGTTAACGGCTGGTCCTCCGAAAGTGATGGCCTACAGAAGCGACCACCTACAGTCTGGGTTAAGCGTCTGACCAACACGCTGCCAGATAACTGTAAGTTCCACCTGATTAACCGGGATGAGTTCGAACAGTATTACGCGGTCTTCACCGGGACAGGACTTCGAGTCTTTGACCTGAAGGGTGTTGAGCAGACGGTCACAGGCGATATGTCCTACGTACAGTCCTCAAAACCTCGTGAAGACTTCCGTATCTCCACGGTAGCTGACTACACGTTCGTTGTTAACCGCAACACTGTGGTGACGAAAGGGACGACCACCAGCCACCCCGGGTACAACTCAAAGACCCGCGCTCTGATTAACCTTAGAGGTGGACAGTATGGCAGGACTTTGCGTATCACCATCAACGGCGGTAAGCAGACGATGTACAAGCTGCCTAACGGGAGCAACGCAGAGACTGACCCACCACTGGTAGATGCCCAGAACATCGGGGCCAAACTGGTAGAGCTGCTGACGGCTGACTATCCGACAGGGTGGTCGTTCACCTTAGGGTCTGGATACATCGTCATTACGTCGACCACAGGCGCAGAGATTACGTCAGTGGAGACCGAAGACGGTTATGCCAACCAGCTCATCAACGCAGTTCTGGACACCGTTCAGACCGTGGCTAAACTACCTCTGGCAGCACCGGACGGTTACATCATCCGTATCCAAGGTGAGACCAATAGTAGCGCCGATGAATACTTTGTGCGCTACGATGCGTCAAAGAAAATCTGGCGTGAGACCATTCAGCCCGGTCAGGTCTTAGGGTTCAACGCTGCAACGATGCCCCATGCTCTGGTGCGCCAAGCTGATGGGACTTTCAGTTTCCAGACGCTGAACTGGTCAGAGCGTGGAGCAGGTAACGATGACACCAACCCGATGCCGAGCTTTGTCGACAACAAGATTAACGATGTGTTCTTCTACCGTAACCGATTAGGGTTCCTGTCAGGAGAGAACTTCATCTTGTCCCGGTCTGCTGGGTACTTTGCGTTCTTCCCTAAATCGGTAGCGACCCTGAGTGACGATGACCCAATCGACTTGGCTGTGAGTCACCCACGTATCTCCATCCTGAAGTATGCCGTACCGTTCGCTGAACAGTTGCTGCTATGGTCGGATGAGGTTCAGTTTGTGGTAACCAGCTCTGGAGTCCTTACCGCAAAGTCTATCCAGTTGGATACCAGCTCTGAGTTCTCTGTGAGTGATGACGCCAAGCCGTATACCATCGGTCGCTCTGTGTTCTTCTCTGCGCCTCGTGGCTCGTTCACCAGCATTAACCGTTACTTTGCGGTGGCTGATGTTACGGACGTCAAGGATGCGGATGACACCACAGGTCACGTTCTGTCGTACATCCCGAACGGAGTGTTCGATACCCAAGGTTCCGGGACTGAGAACTTCATCTCTGTGTTGACCTCAGGTGCTCCAAACAAACTGTTCATCTACAAGTTCCTGTTCAAGGACGGAGTGCAGCTTCAGGCATCTTGGAGCCACTGGGAGTTCGCTGAAGGTAGCCGTATTCTGGCAGCTTCGACCATCGGGTCTACCGTGTATATCGTCCGTAAGCACGCCTATGGTGTGGACCTCGAGACCCTGACATTCATCAAGGAGTCGGTTGACATCTTCGGTGAGCCGTATCGTATCCATGTTGACGGGAAGACATCTATGGTCATCTCACACAACATCTACGATGAGAACCAGAACACCTCAATGGTGGACATCGGGCCAGCCTATGGCAGCGTGCCTCCACCAGCAGGTCAGTACATCATGGTCGATATTGCCGGGAACTATGTGTACCTCCCTGAGACAGACTGGACGAAGACCACGGTGGTCACCTTGAGTGGGAACTGGGCAGGACGTACAGTCTTCATCGGTCGTGTCTTCAAGTTCACCTATCAGTTCTCACGGTTCCTCATTAAGCACGAGGACCAGAACGGGACTGTTACGGAAGACTCTGGTCGCTTGCAGTTGCGTCGAGCTTGGGTTAACTATCAGGATACAGGGGCGCTGACCATGAAGGTGATTAACCGCTACCGTGAGTTCCTGAACACCCTGAACGGCGTTAAGCTTGGTGAGCAGATGGTAGGACGTGTGAACATTGGGGACGGTCAGTATCGCTTCCCGATGAATGGCGATGCTACGCAGACTACGCTCATCCTTGAGTCCGACTATCCGACCCCAGTGTCTATCGTTGGGTGCGGCTGGGAAGCCTCATATGCCCGTAAGGCTGCAAGTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e4501f193d8d7e6b6ef94cc3918e67e49c109e20e8ab250b5f3986f55be47375
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2985
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
unpublished Yang,Z. 2024-04-03 38065694 GenBank