Protein

View in Explore
Genbank accession
AYP29466.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MQIWIHDKSMRKVCALNNNVPGMLPYSNSQWHQYLEYSTSTFDFTIPKIVNGKLHDDIKYINDQMYVSFYYDNSYHVFYVSQLVENDFSFQVTCNNTNLELAAETSRPLASVDGAKTLEWYLQNLDLLGFAGLEIGINEVSDRTRTITFESQSGTKLEQLHSLMNQFDAEFIFRTELNRDGTLKRFVIDIYQRQDGNHHGIGKVRGDVTLYYQTGLKGVQVSSDKTQLFNAGYFVGKDGLTLGSVVFEEKNELGQVEFYSFKDSPMVYAPLSADKYPSALGGANEIDRWTRRDFQTEYSDVDSLKAYALRTIKQYAYPLMTYTVSVQSSFIENYKDINLGDTVKIIDNNFIDGLALEARVSEMIISFDMPLNNSVVFTNFRKLANKPSDALQQRIDEIVFKSLPYHVEIRTTNGTVFKNGIGRSTVKPILKQGDKIVDATYRFVIDGTIKYSGMTYDMVASEITQPTTLTVAAWVDDKEVASEEVTFLNISDGKQGPKGADGKTPYFHTAWSYSADGTDRFTKVYPNLNLLDGTRDFSGNWDRAWALSNDGSYKGLTVKKRIGEWQGINKPFTAPKDGTYTFSAYVKSSEDTVKLHRFAFKNGEPYWNDGAYSFLGNKSDWFRDSFTIYLKANDTISIRYEIQDKGTLWTAGHKWEEGSVATPWMPSANEVTTADYPKYIGQYTNYNQVDSPNPQDYTWSLIRGNDGKQGPQGPQGLQGPKGDQGIPGPKGADGKTQYIHIAYADTVSGSGFSQTDTNKAYIGMYQDFNAEDSNNPQDYRWSKWKGSDGRDGIPGKDGADGRTPYVHFAYADSSDGQKGFSLTQTGSKRYMGVLTNFIKEDSTNPEDYKWSDMVGSVSVGGRNLLKGSKGPFKPDNKPTDFDNIGFYQNETSVYLEQNKKYIISAKTDGNFTADHIVDAESDNVTLWLFRQWDLWEIVSDSKTGTTGTQFTWTHPTGTYHLRVNTYHKTAIKSVWEVKIEEGTIKTDWTPAIEDIQDEIDSKADDVLTQAQLNRLNETNSIIKAELAAKASLDTLDQWKQAYQDFVNANNANRAQAEKDLADASARVVKLENNLNDMSERWNFIDSYMSASNDGFVIGKKDNSSSIMFNPDGRISMFSAGNEVMYISKGVIHIENGIFSKTIQIGRYREEQDLLNPDRNVIRYVGGA
Physico‐chemical
properties
protein length:1167 AA
molecular weight: 131622,53800 Da
isoelectric point:5,20210
aromaticity:0,12082
hydropathy:-0,59537

Domains

Domains [InterPro]
DC_0002
STR
1–678
DC_0002 G3DSA:1.20.5.320 DC_0002
IPR010572
ENZ
139–382
IPR010572 PTHR24637 Coil
IPR008983
RBD
561–656
IPR008983 DC_1328
AYP29466.1
1 1167
Architecture
STR
STR 1-1167
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage SW12
[NCBI] 		2419632 No lineage information
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYP29466.1 [NCBI]
Genbank nucleotide accession
MH892361.1 [NCBI]
CDS location
range 15796 -> 19299
strand +
CDS
ATGCAAATTTGGATTCACGATAAAAGTATGCGGAAAGTGTGTGCGTTGAATAACAACGTTCCTGGCATGTTACCATACTCGAACAGTCAATGGCATCAATATCTTGAGTATTCAACAAGTACTTTTGATTTTACGATTCCTAAAATTGTAAACGGTAAGTTGCACGATGATATCAAATACATCAATGACCAAATGTACGTGTCATTTTACTACGATAATTCATACCACGTTTTCTATGTATCTCAACTCGTTGAAAATGATTTTAGTTTTCAAGTGACTTGTAATAATACAAACTTGGAACTTGCAGCAGAAACATCACGTCCGTTAGCTAGTGTTGACGGTGCTAAAACTCTGGAGTGGTATCTTCAAAACCTTGACTTATTGGGATTTGCAGGACTAGAAATTGGTATTAATGAAGTTTCTGATAGAACAAGAACTATCACGTTTGAATCTCAAAGTGGCACAAAATTAGAACAGCTTCATAGCTTGATGAATCAATTTGATGCTGAATTTATTTTTCGTACCGAATTAAACCGAGATGGCACTTTGAAGCGCTTTGTCATTGACATTTACCAACGACAAGATGGAAATCATCACGGAATTGGAAAGGTTCGAGGGGATGTAACTCTTTACTATCAAACAGGATTGAAGGGTGTTCAAGTATCCAGCGATAAGACTCAACTTTTTAACGCTGGATATTTTGTTGGAAAAGACGGACTAACGCTAGGAAGCGTTGTGTTTGAGGAAAAGAATGAGTTAGGACAAGTAGAGTTCTACTCATTTAAAGACAGTCCGATGGTTTACGCACCACTATCAGCAGATAAATATCCATCTGCCTTGGGTGGTGCTAACGAAATAGATAGATGGACACGTAGAGATTTCCAAACAGAATACAGCGATGTTGATTCCCTCAAAGCTTATGCATTGCGCACAATCAAGCAGTATGCTTATCCTCTAATGACATATACTGTCAGCGTTCAATCTAGTTTCATTGAAAACTACAAGGATATCAATCTAGGTGACACTGTTAAAATCATCGATAACAATTTTATAGATGGTCTTGCCCTTGAAGCTCGAGTTTCTGAAATGATAATAAGTTTCGATATGCCTTTGAATAATTCAGTGGTATTTACTAATTTCAGAAAGCTCGCAAACAAACCCTCAGATGCCTTACAACAACGTATCGATGAGATTGTTTTTAAGTCATTGCCATATCATGTTGAGATAAGGACAACGAATGGTACAGTATTTAAGAACGGTATTGGTCGTTCTACTGTTAAGCCAATTTTGAAACAAGGCGATAAAATTGTTGATGCAACTTATCGATTTGTTATTGACGGAACAATTAAATATTCAGGTATGACCTATGATATGGTAGCGTCAGAGATCACTCAACCAACAACATTGACGGTTGCTGCATGGGTGGATGATAAAGAAGTAGCTTCAGAAGAAGTTACTTTTTTAAATATATCGGACGGTAAACAAGGTCCTAAAGGTGCAGATGGTAAAACGCCATATTTCCACACAGCTTGGTCTTATAGTGCCGATGGTACAGATAGATTTACTAAAGTTTATCCTAACTTGAATCTGCTTGATGGTACTAGAGATTTCAGCGGAAATTGGGATAGAGCTTGGGCTTTGTCAAATGATGGATCATACAAAGGTTTAACCGTTAAAAAAAGAATAGGTGAATGGCAGGGTATTAATAAACCGTTTACAGCACCAAAAGATGGAACTTATACTTTCTCAGCTTATGTCAAAAGTTCAGAGGATACTGTAAAATTACACAGATTTGCTTTTAAAAATGGAGAACCCTATTGGAATGATGGGGCATATAGTTTTCTAGGAAATAAAAGTGACTGGTTTAGGGATAGTTTCACTATATATTTAAAAGCCAATGATACTATTTCTATAAGATATGAAATTCAAGACAAAGGCACTTTATGGACTGCTGGGCATAAGTGGGAAGAAGGCTCAGTAGCTACACCGTGGATGCCATCAGCTAACGAAGTCACAACTGCTGATTATCCAAAATACATTGGTCAGTACACAAACTATAATCAAGTTGATAGTCCTAATCCTCAAGATTACACTTGGAGTTTAATTAGAGGTAATGATGGTAAGCAAGGTCCACAAGGTCCTCAAGGTTTGCAAGGACCTAAGGGAGACCAAGGGATTCCTGGTCCTAAAGGAGCAGATGGGAAGACACAGTATATCCATATCGCTTATGCTGATACTGTTTCAGGTAGTGGCTTTAGTCAAACAGATACTAATAAAGCCTATATTGGTATGTACCAAGACTTCAATGCCGAAGATAGCAACAATCCACAAGACTATCGTTGGTCTAAATGGAAAGGTAGCGATGGGCGAGATGGGATTCCCGGAAAGGATGGAGCAGACGGACGAACACCTTACGTGCATTTCGCTTACGCAGATAGCTCAGATGGTCAAAAGGGTTTCAGTTTGACTCAGACTGGAAGTAAGCGCTATATGGGTGTACTTACCAACTTCATAAAAGAAGACAGCACCAATCCAGAAGATTACAAGTGGAGTGACATGGTTGGTAGCGTCTCGGTTGGTGGTAGAAATCTATTGAAAGGTTCTAAAGGTCCTTTTAAACCTGACAATAAACCAACTGATTTTGATAATATTGGTTTTTACCAAAATGAGACTTCTGTCTATTTAGAGCAAAACAAAAAGTACATCATTAGTGCAAAAACAGATGGTAATTTTACTGCTGACCACATTGTGGATGCTGAAAGCGACAATGTGACACTTTGGTTGTTTCGTCAATGGGACTTGTGGGAAATTGTTTCCGATTCAAAAACTGGTACTACAGGAACTCAGTTCACTTGGACTCATCCGACAGGTACATATCATCTACGTGTAAATACATATCATAAAACAGCAATCAAATCTGTTTGGGAAGTGAAGATTGAAGAAGGGACAATCAAAACTGATTGGACACCCGCCATCGAGGATATACAAGATGAAATTGATTCCAAAGCTGACGATGTCCTAACACAAGCACAACTCAACAGACTGAACGAAACGAACTCTATTATTAAGGCTGAACTTGCTGCTAAAGCATCTCTTGATACACTTGACCAATGGAAGCAAGCATATCAAGATTTCGTTAACGCAAACAACGCCAATCGTGCGCAAGCCGAAAAAGATTTAGCTGATGCTAGTGCACGAGTAGTGAAACTAGAAAATAACTTAAACGATATGTCAGAACGTTGGAATTTCATCGATAGCTACATGTCAGCATCAAATGATGGCTTTGTCATCGGTAAAAAAGACAATTCTAGCTCTATCATGTTCAACCCAGATGGTCGCATATCAATGTTTTCAGCGGGTAATGAAGTTATGTACATTTCAAAAGGTGTCATCCATATCGAAAACGGTATTTTCTCTAAAACTATCCAAATCGGACGATATCGAGAGGAACAAGATTTATTGAATCCAGACCGTAATGTCATTAGATACGTAGGAGGTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1403a31f8de2f273afe7c67362a3e54159afb1779d16df073ba1a5ddfe43d81a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7268
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Biodiversity of Streptococcus thermophilus Phages in Global Dairy Fermentations Lavelle,K., Martinez,I., Neve,H., Lugli,G., Franz,C., Ventura,M., Bello,F., Sinderen,D. and Mahony,J. 2018 — GenBank