Protein

View in Explore
Genbank accession
UYD57804.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNNNIKYHISDSADSVFFSGPDWPSSVETVSDALNEIAPWALTVNGLPIATETVPGIIRIATASEASAGTSNNTVITPNLLRIAMQTPQATESIVGNTRYATNAEALALSINTAAITPSKLGHVIANKGSTEAARGTIRISTAAQALSGTDDTTAMTPLKTKQAIAHFSESWGTATESSDGVVRLATLAQALAGVLRDGYAVSPYTLSRMAGTESSAGLFKVATNSQTLALADNTVVITPAKLAVLNATSTQKGLVRLLNTESSQANTALSANAQVLYRSGGTMTGNINFTENNQGILWNRNTDLAAITFKNDSDADTNSYLLFAVGDNNNEYFRWTTRAGGVDTTIATLRPGGHLWLAGNIDINDMYVRCDARLKTDIQPIKDALAKIDSLDTGIYTKHKSLTDDTVIGKEAGIFAQQLQKVLPEGVKTLDDGTLTVSPMSLIALLIEANKELKSRLEKLEEKI
Physico‐chemical
properties
protein length:465 AA
molecular weight: 49335,90370 Da
isoelectric point:5,29924
aromaticity:0,05161
hydropathy:-0,10344

Domains

Domains [InterPro]
DC_0176
STR
1–424
DC_0176 Coil
IPR030392
CHP
371–429
IPR030392
IPR030392
CHP
372–465
IPR030392
DC_0131
RBD
408–465
DC_0131
UYD57804.1
1 465
Architecture
STR
RBD
STR 1-424 | RBD 425-465
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage avDM3
[NCBI] 		3101596 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYD57804.1 [NCBI]
Genbank nucleotide accession
OP380595.1 [NCBI]
CDS location
range 102195 -> 103592
strand +
CDS
ATGAATAACAATATCAAATATCATATTTCGGATTCAGCGGATTCGGTATTTTTCTCTGGGCCAGATTGGCCCAGTTCAGTTGAAACCGTATCAGACGCATTGAATGAAATAGCACCATGGGCATTAACTGTTAATGGCCTTCCGATAGCAACCGAGACTGTGCCCGGCATCATTCGAATTGCCACTGCATCTGAAGCATCAGCTGGTACGAGTAACAATACTGTTATCACCCCAAATCTTTTGCGAATTGCGATGCAGACGCCTCAAGCTACCGAGTCCATCGTTGGTAATACTCGTTACGCAACAAACGCCGAAGCTTTGGCCTTATCTATTAACACCGCTGCAATAACACCTTCGAAACTGGGGCATGTCATTGCAAATAAAGGTTCTACCGAAGCGGCAAGAGGAACAATCCGTATATCGACCGCTGCCCAAGCGTTGTCTGGCACCGACGATACCACTGCTATGACTCCTCTTAAGACCAAGCAGGCTATTGCGCATTTCTCAGAATCATGGGGAACTGCAACAGAAAGCTCAGACGGAGTTGTCCGTTTGGCCACGTTGGCTCAAGCTTTAGCAGGAGTTCTTAGAGATGGCTATGCTGTTAGTCCATATACTCTATCAAGAATGGCAGGGACGGAAAGCTCAGCTGGATTGTTTAAAGTAGCAACAAATTCGCAAACATTAGCATTAGCTGATAACACTGTCGTTATTACTCCAGCTAAACTTGCTGTATTGAATGCTACTAGCACTCAAAAAGGATTAGTTCGCCTTCTTAATACTGAAAGCTCACAAGCGAATACGGCTCTTTCTGCTAATGCCCAGGTGTTGTATCGCTCAGGTGGCACAATGACTGGTAATATCAATTTCACAGAAAACAATCAAGGAATTTTGTGGAATAGAAATACCGATTTGGCTGCTATAACATTCAAAAACGATAGTGACGCTGACACGAATTCGTATTTGCTTTTTGCTGTTGGAGACAATAACAACGAGTATTTTAGATGGACAACTCGTGCCGGTGGTGTAGATACCACAATTGCGACACTTAGGCCAGGTGGTCATTTATGGCTAGCCGGGAACATCGACATTAACGATATGTATGTTCGTTGCGATGCTAGATTAAAAACCGATATTCAGCCTATCAAAGATGCACTTGCGAAGATAGATAGCCTTGACACTGGGATTTACACAAAACATAAATCTTTGACTGACGATACTGTGATAGGCAAAGAGGCAGGTATTTTTGCTCAGCAATTGCAAAAAGTTTTACCAGAAGGTGTTAAAACACTTGATGACGGAACTCTTACTGTTTCTCCAATGTCTCTCATTGCATTACTGATTGAGGCTAATAAAGAGCTTAAATCCAGATTAGAAAAACTCGAGGAAAAAATATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5a5539d15c8de4f0effbeadd3aef194d03576b3b8ba824a6304b6e42b803e53a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7750
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
On Diversity and Genetic Richness: Insights on Aeromonad Phage Diversity through Physicochemical and Molecular Analysis Papa,D.M., Rousseau,G., Tremblay,D., Labrie,S., Gutierrez,T.A., Ramos,J.D. and Moineau,S. 2024-03-24 — GenBank