Protein

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Genbank accession
AUV59861.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGEISPVHKEIGGKRMSLGNQYLILDSHFNNVGLLTVDGATKFTSDSISMQLADSDATSTEYDDDVSVGTEDNYQGTVNLNAQSKKFDHKGTVTVPQGQPDSDKVVSGNYLAYHDDYLNRWYVMYIYSTSEETTITSSVNTVAYVCNLMLRDLAFTIPIKSTVTSQNAEQVFSKVFQNSGWQVDYNTSNVNLVSTDMFDGKTKGTVLLQSAIQLFDVEIDAYVTINTQGKIVDKIVEITDELSSDIVYKEAIFGQNITNIKRTTVAAPITKLYAYGENGSTMAPHNNGATYIVDDDANQLYNYEGSLQGKYLEGVITANQISDNTGLKAWAQQMLKLFNHPRTYYEVNVAPGFLPPLGTTIRFKDDHITPALDATGRVIQRTISFASPYSSTIAFGEFVTVPVATPSWLTDYQSALEDAVSKALSDATAITPVLSHPDGLDFAQGETSKRLLLSAWVGKQNISTYVDSKGFAWRHVNTDGSIDPNWEQTGDIINVTPSLMGNIRAYIDGDYISEDPELSINQNNYVKIGEFDPYDSDVHRIAQHLEQLDDGTWYESAATSGDDCNFMHRDKDFKLIDKMVLTGGGHGTTFGVMYQEGQPWIMCNQRNSSGNWDIVRFKYQGGKTLGINDTDHLITPGGYPRVAFDREHNVAGYSSGGYMFFVLNVSDLLAGVKTVMYTINMLDYDFVGDDDIFQGQALDFPYVYWSVGNQYLGKTCSFYCVNLLHRGEVMHPYYDTLIGLGLSNQIIEPESLSFATINGKKTLVHSFNVTPPDGNPPKKQMQYSTDIVYRPAMPIVNDDNNGSDDSDDVDDG
Physico‐chemical
properties
protein length:812 AA
molecular weight: 89969,87880 Da
isoelectric point:4,55118
aromaticity:0,10591
hydropathy:-0,34187

Domains

Domains [InterPro]
DC_1956
STR
9–588
DC_1956 DC_1088
IPR007119
Unmapped
83–396
IPR007119 IPR048799
IPR010572
ENZ
160–398
IPR010572
AUV59861.1
1 812
Architecture
STR
RBD
RBD
STR 9-588 | RBD 589-709 | RBD 711-811 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUV59861.1
1 812
Domain Start End Length (AA) Confidence
N-terminal 1 775 775 0,9772
Central domain 776 801 27 0,1758
C-terminal 802 812 10 0,0756
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-775
Central
776-801
C-terminal
802-812

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage Nyseid
[NCBI] 		2079432 Uroviricota > Caudoviricetes > Tybeckvirinae > Lenusvirus nyseid >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUV59861.1 [NCBI]
Genbank nucleotide accession
MG765276 [NCBI]
CDS location
range 54349 -> 56787
strand -
CDS
TTGGGAGAAATATCTCCCGTACATAAAGAAATAGGAGGCAAACGGATGTCACTTGGTAATCAATATTTAATTTTAGATTCTCATTTTAATAATGTCGGGTTACTAACCGTCGATGGAGCTACTAAATTTACTAGTGATTCAATTTCAATGCAACTAGCAGATTCAGATGCTACTAGTACAGAATATGACGATGATGTTAGTGTTGGGACAGAGGATAACTACCAAGGGACGGTTAATCTGAATGCTCAATCTAAAAAATTCGACCATAAAGGAACTGTTACAGTCCCACAAGGACAACCAGATAGTGACAAAGTAGTATCAGGAAACTATCTAGCATATCATGACGATTATTTGAATAGATGGTATGTTATGTATATTTACTCAACATCAGAAGAAACAACAATCACGTCGTCTGTCAACACTGTAGCTTATGTATGTAATTTAATGCTTCGAGATTTGGCCTTCACTATTCCAATTAAGTCAACTGTTACAAGCCAGAACGCTGAGCAAGTATTTAGCAAAGTTTTTCAGAACTCCGGCTGGCAAGTTGATTATAATACATCAAACGTAAATTTAGTTAGCACAGATATGTTTGATGGTAAGACAAAAGGTACCGTCTTGCTCCAAAGTGCAATACAATTGTTTGACGTTGAAATTGATGCTTACGTTACAATTAATACGCAAGGTAAAATAGTAGATAAGATTGTTGAAATCACTGACGAGCTTTCTTCTGATATTGTATACAAAGAAGCTATTTTTGGACAAAATATAACGAATATTAAGCGAACAACAGTCGCTGCACCCATCACTAAATTATACGCTTATGGTGAAAATGGGTCAACAATGGCACCACACAACAATGGTGCGACATATATTGTCGATGATGACGCTAATCAATTGTACAATTATGAGGGGTCTCTCCAAGGAAAGTATCTGGAAGGCGTCATTACTGCAAATCAGATCAGTGACAACACTGGGCTGAAAGCTTGGGCACAGCAGATGTTAAAATTATTTAATCATCCCAGGACATATTATGAGGTGAATGTTGCTCCCGGATTTTTGCCACCTCTAGGAACGACAATTAGATTTAAAGATGATCACATTACTCCGGCTCTCGATGCAACTGGACGCGTCATTCAACGTACGATTAGCTTTGCATCTCCATATTCAAGCACTATTGCTTTTGGTGAATTTGTAACAGTTCCAGTCGCCACTCCTTCATGGTTGACAGATTACCAATCAGCGCTAGAAGATGCAGTTTCTAAAGCACTAAGTGACGCAACTGCAATCACTCCTGTATTATCTCATCCAGATGGGTTAGACTTTGCGCAAGGTGAAACATCAAAAAGACTGCTTCTGAGTGCATGGGTTGGTAAGCAAAACATTAGTACTTACGTTGATAGTAAAGGGTTTGCTTGGCGACACGTGAATACAGATGGCTCAATAGATCCTAACTGGGAACAAACAGGAGACATTATAAATGTAACTCCATCACTTATGGGGAATATTCGAGCCTATATTGATGGTGACTACATATCAGAAGATCCTGAATTGTCAATCAATCAAAACAACTATGTTAAAATCGGAGAGTTTGATCCATATGATAGTGATGTTCACCGTATTGCCCAACACTTAGAGCAGTTAGATGATGGTACGTGGTACGAATCTGCTGCTACTAGTGGGGACGATTGCAATTTTATGCACCGTGATAAAGATTTCAAGCTTATAGATAAAATGGTTTTAACTGGTGGAGGACATGGTACTACCTTTGGAGTTATGTATCAAGAAGGGCAACCATGGATTATGTGTAATCAACGTAATAGTTCAGGTAACTGGGACATCGTTAGGTTTAAGTATCAGGGTGGCAAAACATTGGGAATTAATGACACTGATCACTTAATTACTCCAGGGGGCTATCCAAGGGTGGCATTTGACAGAGAGCACAATGTTGCCGGATATAGTAGTGGTGGCTATATGTTCTTTGTTTTAAACGTATCTGATCTACTAGCCGGTGTAAAAACGGTTATGTATACGATAAATATGCTCGATTATGACTTTGTCGGTGATGATGATATATTCCAAGGACAGGCGCTTGATTTCCCTTATGTTTATTGGAGCGTTGGCAACCAGTATTTAGGGAAAACATGCTCTTTCTATTGCGTTAATTTATTACATCGCGGAGAAGTCATGCACCCATATTATGATACATTAATTGGTTTGGGTCTTTCTAATCAAATCATTGAACCAGAAAGTCTATCATTTGCGACTATAAACGGAAAGAAAACACTTGTACACTCATTTAATGTCACACCACCGGACGGTAATCCGCCGAAGAAACAAATGCAATATTCAACTGATATTGTCTATCGTCCGGCAATGCCAATTGTCAACGATGATAATAACGGAAGCGACGATAGTGATGATGTTGATGATGGTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
f5738b36071be549c5b2a6715030bf7df03d5d76e28560e92613dd4cddfbbaf7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7848
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lactobacillus phages that infect wine-derived L. plantarum strains Kyrkou,I. and Hestbjerg Hansen,L. 2018-12-03 — GenBank