Protein

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Genbank accession
XYA29481.1 [GenBank]
Protein name
membrane protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MASGLLIDLNDGNPVMQITAGMRCPSFCNLVSNTWDEKVVNVDGYVPGAQIVVIPRDPVSIQNRGTNLVPTIGMQSGYSQNGSQLTFSTWWSDNWGRDRLYDLTICQILPSSTGQGLFIADSTDFTAIPDSTRAGFCVWAGTITFTGQWRTPDTGYDRNKYMVFARWSADGVTVEYDGNNIYARNETNGEEGDATVTMRVAIFASGVAPQAGTGLNFFNAAGQCTFSTVRRPFIFRNRFYNPSWDYQDIGEGMILLGRYGFRSRVSGDRCRAKFAGLMMSGNSVRCASGITKSNWTSRYSVVQDRLVGMSVPIIENMY
Physico‐chemical
properties
protein length:318 AA
molecular weight: 35129,11860 Da
isoelectric point:6,33314
aromaticity:0,11635
hydropathy:-0,20786

Domains

Domains [InterPro]
IPR045604
STR
4–296
IPR045604
XYA29481.1
1 318
Architecture
STR
STR 4-296 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYA29481.1
1 318
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,2235
Central domain 11 209 200 0,0162
C-terminal 210 318 108 0,9910
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-318

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnS-Tlon
[NCBI] 		3447925 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYA29481.1 [NCBI]
Genbank nucleotide accession
PV891804 [NCBI]
CDS location
range 1975 -> 2931
strand -
CDS
ATGGCAAGCGGTTTACTAATCGATCTCAATGATGGTAATCCGGTAATGCAAATTACGGCGGGCATGCGTTGCCCGTCATTTTGCAACCTGGTAAGTAACACATGGGATGAGAAAGTGGTTAACGTGGATGGATATGTTCCAGGTGCGCAGATTGTCGTTATACCTCGCGATCCAGTATCCATCCAAAATAGGGGTACAAACCTTGTACCAACTATCGGGATGCAAAGTGGTTACTCGCAGAACGGATCGCAACTTACTTTTTCTACGTGGTGGTCTGATAATTGGGGGCGCGATCGACTTTATGATTTAACAATCTGTCAAATCCTTCCCTCCTCCACAGGGCAAGGGTTGTTTATTGCCGATTCCACCGACTTTACCGCAATCCCAGACTCAACGCGGGCCGGGTTTTGCGTGTGGGCCGGAACGATCACGTTTACAGGGCAATGGCGAACTCCCGATACCGGATACGACCGCAATAAGTATATGGTGTTTGCTCGCTGGAGCGCTGACGGCGTGACGGTCGAATATGACGGAAACAACATCTACGCCAGGAATGAAACGAACGGCGAGGAGGGCGACGCTACGGTTACAATGCGGGTTGCAATTTTCGCCAGCGGAGTTGCGCCACAGGCGGGAACCGGATTGAACTTTTTCAACGCGGCTGGCCAATGCACATTCTCCACGGTTCGCCGTCCGTTTATCTTCAGGAACAGATTCTATAACCCGTCGTGGGATTATCAGGATATAGGCGAGGGAATGATTTTGCTTGGAAGGTATGGATTCAGAAGCAGGGTTAGCGGAGATAGGTGCAGGGCAAAATTTGCCGGGTTAATGATGAGCGGTAATAGCGTAAGATGTGCAAGCGGTATCACAAAATCTAACTGGACGTCAAGATATAGCGTCGTCCAGGATCGATTAGTCGGCATGAGCGTTCCCATTATTGAAAACATGTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a464b4c9045135c2d726d57289786ad032cad6b2d4728188413c2e4181b1a9dd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8705
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genomic Analysis of Seven Phages Active Against Carbapenem-Resistant Klebsiella pneumoniae Cuello,L., Parmar,K., Supandy,A., Van Tyne,D. and Patel,R. — — GenBank