Protein

View in Explore
Genbank accession
YP_002922730.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,55
Protein sequence
MSLKLTNNGVSKLASSLGPDDTSLAVLPGDGSKFPALAAGDWFPATIIKSDAFSEIVKVTGRSGDTFTIVRGFESTAVLTFSPGDRVELRSTAFSLQNTSDVTPASANLDRTINLRSLYQILDLLEPVGTVKYWDSDDPPPPGYFVCNGQNGTPDWRDRFIVGAGASYARRATGGANTVTLGPEHMPVHSHGVRDPGHAHGVADPGHNHYVNDPGHNHNNGIFSRLLRPPYPGSITGSDTAGSGSEQAVGGGDSADIVPSGTGIWLNGSGTGISIYGSGTGIWLDNAGGGQTHENRPPYVAIPIIRKMVTAISTLG
Physico‐chemical
properties
protein length:316 AA
molecular weight: 32974,12410 Da
isoelectric point:5,75139
aromaticity:0,07278
hydropathy:-0,25823

Domains

Domains [InterPro]
DC_0891
STR
1–315
DC_0891
cd22641
STR
98–200
cd22641
SSF88874
STR
126–303
SSF88874
YP_002922730.1
1 316
Architecture
STR
STR 1-315 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage BcepIL02
[NCBI] 		2886898 Uroviricota > Caudoviricetes > Lessievirus >
Host Burkholderia cenocepacia
[NCBI] 		95486 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_002922730.1 [NCBI]
Genbank nucleotide accession
NC_012743.2 [NCBI]
CDS location
range 35430 -> 36380
strand +
CDS
ATGAGCCTGAAACTGACCAACAACGGCGTGAGCAAGCTCGCGTCATCATTGGGGCCGGACGATACGAGCCTCGCCGTTCTCCCCGGCGATGGCTCGAAGTTTCCTGCGCTCGCCGCGGGTGACTGGTTCCCGGCCACGATCATCAAGTCGGACGCCTTCTCAGAGATCGTCAAGGTAACGGGCCGATCAGGCGACACGTTCACGATCGTGCGCGGCTTCGAAAGTACGGCCGTGCTTACCTTCTCACCGGGCGACCGCGTAGAGCTCCGCAGCACGGCTTTCAGCCTCCAGAACACCAGCGACGTCACGCCAGCCTCGGCGAACCTTGATCGCACCATCAATCTCCGCTCGCTGTACCAGATTCTCGACCTGCTCGAGCCGGTCGGAACGGTGAAGTATTGGGACAGCGACGATCCGCCGCCGCCGGGCTACTTCGTCTGCAACGGGCAAAACGGCACGCCCGACTGGCGTGACCGCTTCATCGTCGGCGCCGGCGCCAGCTATGCGCGCCGCGCGACGGGCGGCGCGAACACCGTGACACTCGGCCCCGAGCACATGCCGGTCCACAGTCACGGCGTTCGCGATCCGGGCCACGCGCACGGCGTCGCCGATCCGGGCCACAACCACTACGTCAATGATCCTGGGCACAACCACAACAACGGAATCTTCAGCCGGCTGCTGCGCCCCCCGTATCCCGGATCGATAACGGGCTCGGACACCGCCGGCAGCGGGTCGGAACAGGCGGTCGGCGGGGGAGACTCCGCAGACATCGTTCCATCGGGAACGGGCATCTGGCTCAACGGCTCCGGCACCGGGATCAGCATCTACGGCTCAGGCACCGGAATCTGGCTCGACAACGCGGGCGGCGGACAGACGCACGAGAACCGGCCGCCCTACGTCGCAATCCCGATCATCCGCAAGATGGTCACGGCAATCAGCACCTTGGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
927359dfdd1109be600a4799fc0627756fed01a07b2ee194876ada4dbf39fb7c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7521
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome and characterization of Burkholderia cenocepacia phage BcepIL02 Gill,J.J., Summer,E.J., Russel,W., Cologna,S., LiPuma,J.J., Gonzalez,C.F. and Young,R.F. 2022-04-21 — GenBank