Protein

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Genbank accession
QYC53245.1 [GenBank]
Protein name
pre-neck appendage protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MINFNQLETLNKCLIDWNVNYSVYPYNGYTINEVLCQFFDAINKGIITINEYTKMICAIMEWIKEEGLKEEVEKALDKMVEDGTFDDILNEKLLGDIMERLDEIENINKEQNKAIEKNTNAIAEIDKLVKSYGFVTVNMFGAKGDGETDDTKAFNDAINYCKERNITSLFIPYGNYLTTGLINATGVNLVGMYKPVIPFLEWEYTRPTSQLDHFEKYFKMCKGSVIGSKDNTIFVGGLDCKNIGLFGNRRKENQSGYLQLEGGYGKGVNMTDCFVSGFGGVGVKADYGLISSQFINTTITQCGKEGLYIGKVKGTYTGETNFLTIERCTIYRNESHGILADVMGRGFNIILNDFEFNGEPSDPQRPKPTSVDDMVFGCKLLVSGNGGFSSGAIKFEGNYTEETLGMLYIKNTGGTCQGVDINCNMAYPYNTTEMENIGIYLDGWLDRINISNNNMYFAKKLVLNGNQIQSIRTDIEPIHGGDTTGSVAWQVTTENGYNKIVMNSLYEEELFSKNGFITREGYHEDGVTHYPFDKSNTHINGVEIDYDDARNPMVGKILILDGNYVGYVHSVSWTQGVINIRGNRVISRTSGNVKFVDCGGFITRDGTGTKRKMVIDWDGTVVGI
Physico‐chemical
properties
protein length:624 AA
molecular weight: 69751,00730 Da
isoelectric point:4,91557
aromaticity:0,10737
hydropathy:-0,31522

Domains

Domains [InterPro]
DC_0396
ATT
1–195
DC_0396 DC_0525
Coil
Unmapped
94–124
Coil IPR011050
IPR024535
ENZ
134–191
IPR024535
IPR012334
STR
135–510
IPR012334
QYC53245.1
1 624
Architecture
ATT
STR
RBD
ATT 1-195 | STR 196-510 | RBD 511-624
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QYC53245.1
1 624
Domain Start End Length (AA) Confidence
N-terminal 1 147 147 0,9830
Central domain 148 516 370 0,9630
C-terminal 517 624 107 0,8253
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-147
Central
148-516
C-terminal
517-624

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage CPQ10
[NCBI] 		2863148 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clostridium perfringens
[NCBI] 		1502 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Eubacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYC53245.1 [NCBI]
Genbank nucleotide accession
MZ401009 [NCBI]
CDS location
range 10140 -> 12014
strand +
CDS
ATGATTAACTTTAATCAACTTGAAACATTAAACAAATGTCTTATAGACTGGAATGTTAACTATTCTGTCTATCCATATAATGGTTACACAATTAACGAAGTCTTATGTCAGTTTTTCGACGCAATTAATAAGGGAATAATAACCATAAATGAATATACTAAAATGATATGCGCTATAATGGAATGGATTAAAGAAGAAGGTCTAAAAGAAGAAGTCGAAAAGGCGCTTGACAAAATGGTAGAAGACGGAACTTTCGACGACATCTTAAATGAAAAACTTTTAGGCGATATCATGGAAAGATTAGACGAGATAGAAAACATTAATAAGGAACAGAATAAGGCAATAGAAAAAAATACTAATGCCATAGCAGAAATTGACAAACTTGTCAAGTCTTATGGTTTCGTTACTGTCAATATGTTTGGAGCAAAAGGAGACGGAGAGACAGACGACACAAAGGCTTTCAATGACGCCATAAATTATTGTAAAGAAAGAAACATTACAAGCTTGTTTATTCCATATGGAAATTACTTGACAACTGGTTTAATAAATGCTACAGGTGTTAACTTAGTTGGAATGTATAAACCTGTTATCCCTTTCTTAGAATGGGAATACACAAGACCAACATCACAACTTGACCATTTCGAGAAATATTTTAAGATGTGTAAAGGTTCTGTTATTGGTTCAAAGGATAATACAATCTTTGTAGGTGGTTTAGACTGTAAGAATATAGGGCTTTTCGGTAATAGAAGAAAAGAAAATCAAAGCGGATATTTACAACTAGAAGGTGGTTACGGAAAAGGTGTAAATATGACCGATTGTTTTGTTAGTGGTTTTGGTGGTGTAGGTGTTAAAGCCGACTATGGATTAATTAGTTCACAATTCATTAACACAACTATAACACAATGTGGTAAAGAGGGTTTATATATCGGTAAGGTAAAAGGTACTTACACAGGTGAAACAAACTTCTTGACAATAGAGCGTTGCACTATCTACAGAAACGAAAGTCACGGAATATTAGCAGATGTCATGGGACGTGGTTTCAACATAATATTAAATGACTTTGAGTTTAACGGTGAACCGTCCGACCCTCAAAGACCTAAGCCAACATCTGTTGACGACATGGTTTTTGGTTGTAAATTACTGGTGAGCGGTAATGGTGGATTTTCAAGTGGAGCAATAAAGTTTGAAGGAAACTACACAGAGGAAACTTTAGGTATGTTATACATTAAGAATACTGGTGGTACTTGCCAGGGCGTTGACATTAATTGTAATATGGCATATCCTTATAACACTACAGAAATGGAAAACATTGGGATTTATTTAGACGGTTGGTTAGATAGAATTAACATATCAAATAATAATATGTATTTTGCTAAAAAGCTAGTTTTAAATGGAAACCAAATCCAGTCAATAAGAACAGACATAGAACCAATACATGGTGGAGATACTACTGGAAGTGTGGCATGGCAAGTCACTACAGAAAACGGATATAACAAAATCGTGATGAATAGTTTATACGAAGAAGAACTATTTAGCAAAAATGGTTTCATAACTAGAGAAGGTTACCACGAAGACGGTGTTACACATTACCCATTCGATAAATCAAACACTCATATAAATGGTGTGGAAATTGATTACGACGACGCACGTAACCCAATGGTCGGTAAAATCTTAATACTAGACGGAAACTATGTCGGTTATGTTCATTCAGTTTCATGGACACAAGGCGTTATCAACATACGTGGTAATAGAGTTATCTCACGTACTAGCGGTAATGTTAAGTTTGTTGATTGTGGAGGGTTCATCACTAGAGACGGAACAGGAACAAAAAGAAAAATGGTTATCGACTGGGACGGTACAGTAGTGGGAATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a2b5216ff71c1d7ae0fea88cf409d7523d43d98a1a471dcffbab476d1a88f55b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6789
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50