Protein

View in Explore
Genbank accession
AHJ87312.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,76
Protein sequence
MNLTPNDMLKALASIGLDGIISAGLVSSAGVKPLRRNVAIYGDSRTANCSSGSLPNKITENYGYASWLGQYSEGRIFFEPAFNFGVGGNTSAQWAARVGDVIASPSDVVVCLISTNDRTADFTLAQTQQNIEGVVMKLKQAGKIVVFINETPRGGANALTAPRQAIHEQVRAWINSYLPKLGVRVVDVWDKMTDTAAVTVDGLHFNPVGANIVGQALAREIQDLFNSPVPLPRVTSAYDSATNPFGQINTNALLTGTTGTKGGSANTTGDVATGYTVAGSSWTGMTVVASKEAASVGEAQVFKFSGTPTTSGALYTFEQIISLPNAKLAANIKAVADIEFEMTGCLGVSLDFRFLDSGTFNSKCCDRYQDGFPMSPIKVDGVQETPTTAITAGCTEVKIRVAVYGSQNVPMTGTVKIKQLAAIAA
Physico‐chemical
properties
protein length:425 AA
molecular weight: 44690,12900 Da
isoelectric point:6,19502
aromaticity:0,07529
hydropathy:0,04729

Domains

Domains [InterPro]
DC_1569
STR
3–224
DC_1569
IPR051532
Unmapped
27–224
IPR051532
IPR036514
STR
31–223
IPR036514
SSF52266
STR
37–225
SSF52266
cd00229
ENZ
38–219
cd00229 DC_2015
IPR013830
ENZ
41–210
IPR013830
AHJ87312.1
1 425
Architecture
STR
RBD
STR 3-225 | RBD 226-416 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phiPsa374
[NCBI] 		1458843 Uroviricota > Caudoviricetes > Vandenendeviridae > Otagovirus > Otagovirus Psa374
Host Pseudomonas syringae pv. actinidiae ICMP 18800
[NCBI] 		1104681 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHJ87312.1 [NCBI]
Genbank nucleotide accession
KJ409772 [NCBI]
CDS location
range 29286 -> 30563
strand +
CDS
ATGAACCTTACTCCAAACGATATGCTGAAAGCTCTAGCCTCTATTGGCCTAGATGGTATTATCTCTGCTGGCCTTGTATCGAGTGCTGGCGTCAAGCCGCTGCGTCGTAACGTTGCCATCTATGGTGACAGTCGCACAGCAAACTGCTCTAGCGGCTCCCTCCCAAACAAGATCACAGAAAACTATGGCTACGCCTCTTGGCTCGGTCAATACTCTGAGGGTCGTATCTTCTTTGAACCAGCATTCAACTTTGGTGTAGGTGGAAACACTTCTGCTCAGTGGGCTGCTCGCGTTGGTGATGTAATCGCCTCTCCTTCTGATGTTGTTGTATGTCTTATCTCGACTAACGACCGCACTGCTGACTTCACACTTGCTCAAACTCAACAGAACATTGAAGGTGTTGTGATGAAGTTGAAACAGGCTGGTAAGATTGTTGTGTTCATCAACGAGACTCCACGCGGTGGTGCAAACGCCCTGACAGCTCCAAGACAAGCCATTCATGAACAAGTGAGAGCTTGGATCAACAGCTACCTTCCAAAGCTTGGTGTGCGTGTTGTGGACGTTTGGGACAAGATGACTGATACCGCTGCTGTCACTGTAGACGGTCTACACTTCAACCCAGTTGGTGCAAACATCGTCGGGCAAGCCCTTGCAAGAGAAATCCAAGACCTGTTCAACTCTCCAGTGCCCCTGCCTCGCGTTACAAGCGCGTATGACTCTGCTACCAACCCGTTTGGTCAGATCAACACGAACGCCCTTCTAACAGGCACCACAGGGACTAAGGGAGGCTCTGCAAACACAACAGGTGACGTAGCCACTGGTTACACCGTAGCTGGAAGCTCTTGGACTGGTATGACTGTTGTTGCTTCTAAGGAAGCCGCGTCTGTAGGTGAAGCTCAAGTGTTCAAGTTCAGTGGTACACCAACTACATCTGGCGCTCTGTACACATTCGAACAGATCATCAGCTTGCCTAACGCAAAGCTTGCAGCAAACATTAAAGCTGTTGCTGATATTGAATTCGAAATGACTGGATGCCTCGGCGTTAGTCTCGACTTCCGCTTCCTTGACTCTGGCACTTTCAACTCTAAGTGCTGCGACCGTTACCAAGATGGATTCCCAATGTCTCCAATCAAAGTTGATGGTGTTCAAGAAACTCCAACTACAGCAATCACTGCTGGATGTACAGAAGTTAAAATTCGTGTTGCTGTTTACGGCAGCCAAAACGTTCCAATGACTGGGACGGTAAAGATTAAACAACTCGCAGCTATTGCTGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d591332cfc1734700f0d16141b952cfdcd0c1962067ac61695182194be7f3f9e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8233
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification of bacteriophages for biocontrol of the kiwifruit canker phytopathogen Pseudomonas syringae pv. actinidiae Frampton,R.A., Taylor,C., Holguin Moreno,A.V., Visnovsky,S.B., Petty,N.K., Pitman,A.R. and Fineran,P.C. 2014 24487530 GenBank
Characterization of Pseudomonas phiPsa374-like phages Warring,S., Malone,L.M., Easingwood,R.A., Rigano,L., Frampton,R.A., Lopez Acedo,E., Templeton,M.D., Kleffmann,T., Bostina,M. and Fineran,P.C. 2024-10 — GenBank