Protein

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Genbank accession
XVB82363.1 [GenBank]
Protein name
minor head protein
RBP type
TSP
Evidence RBPdetect
Probability 0,52
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MIHVLNFNSEIIDFISQDDSAIIRAEHTRSKEDKSELLNITLLSERAEHFKERNRVIIQEPNGAYKEFIINRLEEEGQYLEIECDASYVEDIGKAKPIPAGKFTKMTVNEALSETLKDSGWEVGLCEYGGIKSMSWTSVRTPHEIISQLTTTYKLEPDYVIEIKGNEVVRRKVNMIQPKPLFEGKEIIYGKDLISMKRTVDMSEVKTALFAFGPEKDDGTRISTVVVDDEAQQQFNLPKRYLWGIYEPESDDQDMTLERLITLTKTELNKRKSSALSYEIDAFDLEKEYPHEIIRFGDIVRIKNPDYTPSLYAESEVVGFVHELISDDLTWQFGNVIEYKEDDLLKYFRSRMEEIEKKLNNNINNSNTIITDRIEEEIERLQRTIHRGETAPPSPEEGDFWYDTSNFKVAVLREFKNGRWENASAHDVEQIGGMTKEAIIYNEINGTFLSISVQHAKVINEVYEVLNSEYLVDEGIRDWLNNELNILLDIYSSITSSLDSMTVETATIGKLMDTQAMIVQYRGQAYALNTALLNARQAIDERFKLLQSQYTDEKYNEAMQKVAEKFGFEYKEDGFLVGDGSLISGAIQALREDTEEQFKQVVKGVDYETDKKGIIERLNGADSAREQLDKLIKDRVTLNEYNNMKVGTENLLLNSLYQDKATSSSLTHAFFRYYLTTPLKVGKTYTFTCNFNTTDTNQSGRTSVRGYTPDNGLIDVDIVEGKIKVTFVAKVESSTFLVYKDIAGTSPHTLNVNVTNAMLVEGDKIGDYQQAPKETAERLKTMETGIEQNGIDISLRAKETDLNKTKQTLSKIAAEILVNTTTGVTLKYDENGTVSDVTVGPSGVKLNTNVFEINDGDVIVKNGVTTIKDAYIDKLFSKQATINYLNSVDITAKRIEAKDNKASVNIENGTITMTRADGHKLDMGINGIEMLNPDGSKRFSMDRLLVTSAALGTSNSNVYLAAQQGYEVRAVDITQIPSDGAWDSYRYVPIRAHSFIGDKLMTNAGTNLYLGSDAEIRMTSRGGYNGTDTIYRNVRALGYFGNFLDSNYVTAGQHIYIRPDSGSEVRFTVRGTTENYVDIRGGIGWLASIAHRDTNARFYIGSDNGVRITGRSLYNGGDIIWRDLAANGLYANFLDINPNTNAVNLYLRADGEVRITKRNTTDSYIPIRAASATWTSSERYKYDIENWDIDVLEHLVDRVQLYSYKLYSEIEEDSQRVRHGVVLERETPDEWKNGDGVDSYEMTAWCLKAIQELTKKVRTLEAELEAK
Physico‐chemical
properties
protein length:1267 AA
molecular weight: 143402,04760 Da
isoelectric point:4,94752
aromaticity:0,08761
hydropathy:-0,48224

Domains

Domains [InterPro]
DC_1353
STR
1–799
DC_1353
IPR007119
Unmapped
25–315
IPR007119 Coil DC_0850
XVB82363.1
1 1267
Architecture
STR
STR 1-1267
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XVB82363.1
1 1267
Domain Start End Length (AA) Confidence
N-terminal 1 662 662 0,9544
Central domain 663 1161 500 0,6479
C-terminal 1162 1267 105 0,9437
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-662
Central
663-1161
C-terminal
1162-1267

Taxonomy

  Name Taxonomy ID Lineage
Phage Mammaliicoccus phage phi31
[NCBI] 		3414226 Viruses >
Host Mammaliicoccus sciuri
[NCBI] 		1296 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XVB82363.1 [NCBI]
Genbank nucleotide accession
PV389077 [NCBI]
CDS location
range 31820 -> 35623
strand +
CDS
TTGATACATGTACTTAATTTCAATAGTGAGATTATTGATTTTATCAGTCAAGATGATTCTGCGATTATTCGAGCAGAACACACTAGAAGTAAAGAAGACAAAAGTGAACTGTTAAATATCACCTTACTTTCAGAAAGAGCAGAACATTTTAAAGAACGAAATAGAGTTATTATCCAAGAGCCTAATGGTGCATATAAAGAATTTATAATTAATAGACTTGAAGAAGAAGGTCAATATCTAGAAATAGAATGTGATGCTTCATATGTAGAAGACATTGGTAAAGCAAAACCTATACCAGCTGGTAAGTTTACGAAAATGACTGTAAATGAGGCACTTTCAGAAACGTTAAAAGATTCAGGTTGGGAAGTTGGTCTTTGTGAATATGGTGGAATCAAGTCAATGTCATGGACTTCTGTACGAACACCCCATGAAATAATTAGTCAATTAACAACCACTTATAAATTAGAGCCAGACTATGTCATTGAGATTAAAGGTAATGAAGTCGTGAGAAGAAAAGTTAATATGATTCAACCGAAACCTTTATTTGAAGGAAAGGAAATCATATATGGTAAAGATTTAATCTCTATGAAAAGAACGGTTGATATGTCAGAAGTTAAAACAGCCTTATTTGCTTTTGGTCCTGAAAAAGACGATGGAACACGTATCAGTACAGTTGTGGTAGATGATGAAGCACAACAACAGTTTAATTTACCTAAACGTTATTTATGGGGTATATATGAGCCTGAATCAGATGACCAAGATATGACACTTGAGAGACTGATCACTTTGACTAAGACCGAGTTGAACAAGCGTAAGTCTTCAGCATTAAGCTATGAAATAGATGCATTTGATTTAGAGAAAGAGTACCCTCATGAAATTATTAGATTTGGAGATATTGTTAGGATTAAAAATCCAGATTACACGCCAAGTTTATATGCAGAAAGTGAAGTTGTTGGTTTCGTACACGAATTAATTTCAGACGACTTAACATGGCAGTTTGGAAATGTAATCGAATATAAAGAAGATGATTTATTAAAATATTTCAGAAGTAGAATGGAAGAAATCGAAAAGAAATTAAATAATAACATCAACAATTCTAATACGATCATCACAGATAGAATTGAAGAAGAAATTGAAAGATTACAAAGAACTATTCACAGAGGCGAAACAGCACCACCAAGCCCAGAAGAAGGCGACTTTTGGTACGATACTAGCAATTTTAAAGTTGCAGTATTACGAGAATTTAAAAATGGTCGTTGGGAAAATGCGTCAGCACACGACGTTGAACAAATTGGTGGTATGACGAAAGAAGCTATTATATACAACGAAATTAACGGCACATTTCTTTCTATATCTGTACAACATGCAAAAGTAATTAACGAAGTATACGAGGTTTTAAATAGTGAATATTTAGTTGACGAGGGTATAAGAGATTGGCTTAACAATGAACTAAATATACTTCTTGACATTTATTCAAGCATTACTTCATCACTAGATAGCATGACAGTAGAAACAGCAACGATAGGTAAATTAATGGATACACAAGCCATGATAGTTCAATATCGCGGTCAAGCGTATGCACTAAATACGGCGTTGCTTAATGCTAGACAAGCCATTGATGAACGCTTTAAATTACTTCAATCGCAATACACAGATGAAAAATACAACGAGGCAATGCAAAAGGTAGCTGAAAAGTTTGGGTTTGAATATAAAGAAGATGGTTTTCTTGTTGGAGATGGTTCTTTAATAAGCGGTGCAATTCAAGCATTACGTGAGGACACTGAAGAACAATTCAAGCAAGTGGTAAAAGGTGTTGATTATGAAACGGATAAGAAAGGTATTATCGAACGTTTAAATGGTGCTGATAGTGCAAGAGAACAATTAGATAAATTGATAAAAGACCGTGTAACTTTAAATGAATACAACAACATGAAGGTAGGTACAGAAAACCTATTATTAAATAGTTTGTATCAAGACAAAGCGACTAGCAGTTCATTAACTCATGCTTTTTTCAGATACTACTTAACGACACCTTTAAAAGTTGGTAAGACGTATACATTTACTTGTAACTTTAATACAACGGACACTAATCAAAGTGGAAGAACATCTGTCAGAGGATATACACCAGATAATGGCCTGATAGATGTCGATATTGTAGAAGGTAAAATCAAAGTAACGTTTGTTGCTAAAGTTGAGAGTTCTACATTCCTAGTTTATAAAGATATTGCAGGTACTTCGCCACATACATTGAATGTGAATGTTACTAATGCAATGTTAGTAGAAGGCGATAAAATTGGCGACTATCAACAAGCACCTAAAGAAACCGCAGAACGTCTTAAAACAATGGAAACAGGCATTGAACAAAATGGTATAGATATATCATTAAGAGCCAAAGAAACAGACTTGAACAAGACAAAACAAACGCTATCTAAAATTGCAGCCGAAATTTTAGTGAACACGACAACAGGCGTGACATTAAAGTATGACGAGAATGGAACAGTAAGTGATGTTACAGTTGGTCCTAGTGGCGTTAAACTGAATACGAATGTGTTTGAGATAAATGACGGGGACGTTATCGTTAAGAACGGTGTCACAACGATTAAAGACGCATACATTGACAAACTATTCTCAAAACAAGCGACAATCAATTACTTAAATAGTGTTGATATAACAGCGAAACGTATTGAGGCAAAAGACAATAAAGCATCTGTAAACATCGAAAATGGCACAATAACGATGACTAGAGCAGATGGTCATAAACTTGATATGGGTATTAATGGTATTGAAATGTTAAATCCCGATGGGTCTAAACGTTTTAGTATGGACAGATTATTAGTTACAAGTGCAGCATTAGGTACATCTAATTCAAATGTATATCTTGCGGCTCAACAAGGTTATGAGGTAAGAGCAGTTGATATTACGCAAATACCAAGTGACGGTGCATGGGATAGTTACAGATATGTACCTATCAGAGCGCATAGCTTTATAGGCGATAAATTGATGACTAACGCAGGAACTAACTTGTATTTAGGTTCAGACGCAGAAATACGAATGACCTCTCGTGGTGGTTATAATGGCACAGATACTATATATAGAAATGTAAGAGCATTAGGATATTTCGGTAACTTTTTAGATTCTAATTATGTTACAGCGGGGCAACATATCTATATTCGTCCGGACAGTGGTTCAGAGGTTAGATTCACTGTTAGAGGTACAACAGAAAATTATGTTGATATTCGAGGTGGTATAGGTTGGTTAGCTTCAATAGCGCATAGAGATACAAATGCAAGATTTTATATTGGTAGCGATAATGGCGTTAGAATTACAGGACGTTCTTTATATAATGGTGGGGATATTATTTGGCGCGACTTAGCGGCTAATGGACTATATGCCAACTTCTTAGATATCAACCCTAATACAAATGCCGTAAATCTTTATTTAAGGGCTGACGGAGAAGTGCGAATTACTAAAAGAAATACGACTGATAGTTATATACCTATCAGAGCAGCAAGTGCAACGTGGACATCTTCTGAACGTTATAAATATGATATTGAGAATTGGGATATAGATGTATTAGAACATTTGGTTGATCGAGTGCAGTTATATAGTTATAAGCTATATTCAGAAATCGAAGAAGACAGTCAAAGAGTTAGACACGGTGTTGTTTTAGAAAGAGAAACGCCAGACGAATGGAAAAATGGGGACGGTGTCGATTCTTATGAAATGACGGCATGGTGTCTTAAAGCTATACAAGAATTAACTAAAAAAGTCCGTACATTAGAAGCGGAATTGGAGGCAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6dd856d7895361aa872c43ea1e222a0d2f6f3cb355b566fbcd35b87dc83bc213
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2811
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterisation of phylogenetically distinct temperate phages from Kenyan Mammaliicoccus sciuri Cherbuin,J.D.R. 2025-12-01 — GenBank