Protein

View in Explore
Genbank accession
QVD49316.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,68
Protein sequence
MPHVHELPSVSPQTVADLRNVTGIVLLEQTVQQVQTDLGEAQDLAQAASTAASTATTTANTAKTTADTAKTTADTAAGNASTALQAANVAVAAAAEASTAVEEAQDQIDTAVADAATAKTLATSANTAASAADTKATNAGTAASNAQTTATAAQTAAGNAQTAANTAQAKADAADTKANNLRTDLDSLTDTVQAIQDQIGGVNQVPVATPITIDVDEDTVNYQGSVFDHVVDPDGDDMVVVESTYNSTKFNAGTQFNTVYGTMLVAVNGNYTFTPNATAQALNDGETGTVAFAILVRDARGGTATWNLTIRVIGSTDEAGGGDDDNTTFDALYDPSFKLIENQNFYSRPTMSKPSKMTSYTQPSYTDPVFGTKIFGLTRVNDTSDNITNLRHVYSRQTAINADNTRSIVRAGNGWWHLYNLQTGQRILGGRTQTPGFGALVDFINECECVWHPTNPKKLWRTGNQGAGCIWYEYDIDTMTTTVLFDLNPLLQALGGAWANAGRAWFKGEGRPSNDGRWWGFQVETASYGMIGLIMYDRQTNTIVGSALTTNRPDHVSTSPLGNYIVPSWYGGTTETLASSATRPMNEANGARAYSRDFSSFTQLSSLGEHSDLAIDAQGNEVFVSVSYRGGTSGQEPDVADGGIYYRRMDNGVAYSLPGNAYQDSSDGGVHLSGLATKKPGWAVVSWYGGTPKTWKDGVVYAVELTPDNPKTLRICHHQTVAQGAEAYIAESHAVPSPDMSMILFASNYGGSVVEDYYVGLPSWAFGVAGAGRPPVNQTLPAVSGQVTPNAVLTCTAGMWSGVGITYSYQWYRDSGTIISGQTTNSFTIPSGAAAGTQYYCRVTATNATDTVYAESNKITVQVPSAPVNTAKPTITGGSAVGSLLTAQPGTWSGLPTPDFTYAWYRNGTALGVTTRTYTANDLGDYTVQVRAENTQGFATEMSTVKTIVAAADPKAAVGSPVNTTNTWQSSGSIAVPSVAVGDSILLVVSLDEGSGDGNLNSITATVLGKPLNLLYSTPLITLSSGRMVRQHYYVADKVTAAGTATINVTFEANTHYAMQAQRFTGGIATVDVTAPGGFNATAFATPHPTGTVSATIANSVEVISLVGATDMSNAALTLPSGFTSMGADNVGPLVAITGYRVRTTIGNIGGTITSMNGGYGSGWAASALNLY
Physico‐chemical
properties
protein length:1172 AA
molecular weight: 122558,75480 Da
isoelectric point:4,74273
aromaticity:0,08020
hydropathy:-0,16852

Domains

Domains [InterPro]
PTHR47372
Unmapped
31–180
PTHR47372 DC_2066
DC_1672
STR
90–417
DC_1672 IPR007110 IPR007110
Coil
Unmapped
94–114
Coil Coil IPR036179 G3DSA:2.60.40.2700
G3DSA:2.60.40.2700
RBD
775–858
G3DSA:2.60.40.2700
DC_1007
ATT
852–976
DC_1007
QVD49316.1
1 1172
Architecture
STR
STR
ATT
STR 90-417 | STR 774-851 | ATT 852-976 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QVD49316.1
1 1172
Domain Start End Length (AA) Confidence
N-terminal 1 393 393 0,7249
Central domain 394 608 216 0,8208
C-terminal 609 1172 563 0,4849
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-393
Central
394-608
C-terminal
609-1172

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage vB_XciM_LucasX
[NCBI] 		2829408 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVD49316.1 [NCBI]
Genbank nucleotide accession
MW825358 [NCBI]
CDS location
range 213340 -> 216858
strand +
CDS
ATGCCACACGTACACGAGCTACCGTCTGTTTCACCCCAGACCGTAGCCGATTTGCGCAATGTCACAGGGATTGTGCTGCTGGAGCAAACCGTACAGCAAGTACAAACGGATTTGGGTGAAGCCCAGGATCTGGCCCAAGCAGCATCAACTGCTGCCTCTACGGCCACCACTACGGCTAACACCGCCAAGACCACGGCCGATACGGCCAAGACCACCGCTGATACCGCAGCCGGCAATGCCAGTACTGCTTTACAAGCTGCCAACGTAGCGGTTGCCGCAGCTGCTGAGGCCAGCACTGCGGTGGAGGAGGCTCAAGATCAGATCGATACTGCTGTGGCCGATGCAGCAACAGCTAAGACCTTGGCGACCTCAGCCAATACGGCGGCCAGCGCTGCTGACACCAAAGCCACCAATGCAGGCACAGCTGCCAGTAATGCGCAGACCACAGCCACTGCAGCGCAGACCGCAGCAGGTAACGCACAGACGGCGGCCAACACTGCTCAAGCAAAGGCCGATGCTGCCGATACCAAGGCCAATAACCTGCGTACCGATTTGGATTCTCTGACCGATACGGTCCAGGCGATCCAAGATCAGATCGGTGGTGTCAACCAAGTCCCGGTGGCCACACCCATCACCATTGATGTGGATGAGGACACAGTCAACTACCAAGGTAGCGTGTTCGACCACGTAGTGGACCCTGACGGTGATGACATGGTGGTGGTGGAATCCACCTACAACAGCACCAAGTTCAATGCCGGCACCCAGTTCAATACTGTCTACGGCACGATGCTGGTGGCAGTCAACGGTAACTACACTTTCACCCCCAACGCCACCGCGCAAGCTTTGAATGACGGAGAGACCGGTACGGTTGCCTTTGCCATTCTCGTGCGTGATGCCCGCGGTGGTACGGCGACGTGGAACCTCACCATTCGTGTGATCGGTTCAACGGATGAGGCCGGCGGTGGAGATGATGATAACACCACCTTTGATGCCCTGTATGACCCCAGCTTCAAACTGATTGAAAATCAGAACTTCTACTCGCGCCCGACAATGTCCAAGCCGAGTAAGATGACCAGCTACACACAGCCGAGCTATACCGATCCGGTGTTTGGAACCAAGATCTTTGGTCTGACCCGCGTCAATGATACCTCGGACAATATCACCAACTTGCGCCACGTCTATTCGCGTCAAACGGCGATCAATGCCGATAACACGCGCTCGATCGTGCGTGCCGGTAACGGTTGGTGGCATTTGTATAACCTGCAAACCGGTCAGCGTATTTTGGGTGGACGTACCCAAACGCCAGGCTTTGGTGCGCTGGTGGATTTCATCAACGAATGCGAATGCGTCTGGCATCCGACCAACCCCAAGAAGCTGTGGCGTACCGGTAACCAAGGTGCGGGGTGCATCTGGTATGAATACGACATCGATACGATGACCACCACGGTCCTGTTTGACCTCAACCCGCTGCTGCAAGCGCTGGGTGGGGCTTGGGCCAATGCTGGGCGTGCCTGGTTCAAGGGCGAAGGTCGTCCTTCGAACGATGGTCGCTGGTGGGGCTTCCAGGTGGAAACGGCCAGCTATGGAATGATCGGCTTGATCATGTACGATCGCCAGACCAACACCATCGTCGGCAGTGCACTGACCACCAACCGTCCCGACCACGTTTCAACCTCACCGCTGGGTAACTATATCGTGCCATCTTGGTACGGTGGTACGACCGAAACGCTGGCGTCCTCGGCCACCCGTCCGATGAATGAAGCCAACGGTGCACGTGCTTACTCGCGTGACTTCTCTTCCTTTACGCAGCTGTCCTCGTTGGGTGAGCACTCAGACTTGGCCATCGATGCGCAAGGTAATGAAGTGTTTGTCTCGGTGTCCTACCGTGGCGGCACCTCAGGTCAAGAACCTGACGTGGCTGACGGTGGCATCTACTATCGCCGGATGGATAACGGTGTGGCCTACTCGCTGCCGGGTAATGCCTACCAAGACTCCTCTGACGGTGGTGTGCACTTGTCAGGCCTTGCCACCAAGAAGCCTGGTTGGGCGGTGGTATCCTGGTATGGCGGTACGCCTAAGACGTGGAAGGACGGTGTGGTCTATGCGGTGGAGCTGACCCCGGATAACCCCAAGACCTTACGTATCTGTCACCACCAGACGGTGGCCCAAGGTGCTGAGGCGTATATCGCCGAATCCCACGCAGTGCCCTCGCCTGATATGTCCATGATCCTGTTTGCCTCCAACTATGGTGGCAGCGTGGTGGAAGACTACTACGTGGGTCTGCCTTCGTGGGCCTTTGGTGTGGCAGGCGCAGGTCGCCCGCCGGTAAACCAAACCCTGCCGGCAGTCTCAGGACAAGTCACCCCCAATGCGGTGTTGACCTGTACGGCGGGCATGTGGTCCGGTGTGGGGATTACCTACAGCTACCAATGGTACCGTGACTCTGGTACGATCATCAGTGGTCAGACCACCAACAGCTTCACCATCCCTTCAGGGGCAGCGGCAGGTACGCAGTACTACTGCCGTGTGACAGCCACCAATGCCACCGATACGGTTTACGCTGAGTCCAACAAGATCACCGTGCAGGTTCCTTCTGCGCCGGTCAACACGGCCAAGCCCACCATCACCGGTGGTTCGGCAGTGGGTAGCTTGCTCACAGCGCAGCCGGGTACGTGGTCGGGTCTGCCGACGCCGGACTTTACCTATGCTTGGTATCGTAACGGGACAGCGCTGGGTGTCACCACGCGCACCTATACGGCCAATGATCTGGGTGACTACACGGTCCAAGTCCGGGCCGAGAACACCCAAGGTTTTGCAACGGAGATGTCCACGGTCAAGACGATCGTGGCCGCCGCAGATCCCAAGGCTGCGGTGGGTTCGCCGGTGAACACCACTAATACATGGCAGTCCTCCGGCAGTATTGCCGTACCGTCAGTGGCAGTGGGTGATTCGATTCTGTTGGTGGTGAGCCTGGATGAGGGCAGTGGTGATGGTAACTTGAACTCGATCACGGCCACCGTGCTCGGCAAGCCCTTGAACCTGCTCTACTCCACTCCGTTGATCACTCTGTCCTCTGGTCGTATGGTGCGTCAGCACTACTACGTGGCAGATAAGGTGACCGCGGCCGGTACAGCCACGATCAATGTGACCTTTGAGGCCAACACGCATTACGCTATGCAGGCCCAGCGCTTCACCGGTGGTATTGCCACGGTGGATGTCACAGCGCCGGGTGGCTTTAATGCCACAGCGTTTGCCACACCACATCCGACCGGTACGGTCAGTGCGACCATCGCCAACTCCGTTGAGGTCATCAGCTTGGTCGGCGCCACGGACATGTCCAATGCGGCATTGACTTTGCCCTCTGGCTTTACCTCGATGGGTGCAGACAACGTGGGTCCGTTGGTGGCGATCACTGGCTATCGCGTGCGCACCACAATCGGCAACATCGGCGGTACGATTACCTCGATGAATGGCGGTTATGGTTCGGGCTGGGCAGCTTCTGCCTTGAACTTGTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e166770a58f99b8bd55f77443b8d21c2384f6396a0f3da6ab9d2a4dd44dd7bdd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3242
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50