Protein

View in Explore
Genbank accession
XXJ50028.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,55
Protein sequence
MSCKYDIIDEGGRKRVRALRHFTVQGRDVCPMELGGYVYDANTLSQDGNCWIFSGSLEYPGVRVMDEAIVDMGINLPKDTARPKATIISGNSRIMGAISFESRSFNVAQTPAMWEQGGFNITVGSIPIKSNATTRVRIQAQLFAGTVGTVAITSTAYEARLISLNEAGIVTSATAWTVGGPAVTLTSTAPYILVDLRKVGETAITPADVTAAGVTITQAREATVRIFNSSIVPVYNGAVASASRILGYEVTDPSGKPYQVNIQNSYLRIKCSFDKANLVRTNADFIKVNYNLVITPNETHYISGTFRNTNMNTPASVNVVGYAKSLFDVSDCPDFEFSPVTFPDLAAMIASGKTFYFKQCNMPVGSAIHYYDPKVNTWDNIDFTKAMADLGKKAFADTTIVSSNVQGMYRARGNTSGVIGGLLEAASSFDNAAYIGTAGATYDCITYKDCVVKGKFTIRGRCVFGGTPGGASRITNTKATPMVVDGSFRIEGNAQVTDTTLKGTGYIGGNAELKNGIVEGYIYMQDNAKFIPEAVANPPVIRKLIMSGNTKVLKQRDATYSDMCLVMSDNAILDAAVAIFGDLIMMGDSRIVRPGSTNAATVYGTLVLKDRASIEGDVSINARGEVSLVGNFTAVSGRTIIGKKTISDVSQIGETELPPMKQTW
Physico‐chemical
properties
protein length:664 AA
molecular weight: 71164,23100 Da
isoelectric point:8,34964
aromaticity:0,08283
hydropathy:-0,01205

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XXJ50028.1
1 664
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0028
Central domain 11 653 644 0,8075
C-terminal 654 664 10 0,6313
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-653
C-terminal
654-664

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage BT04
[NCBI] 		3446642 Viruses >
Host Bacteroides thetaiotaomicron VPI-5482
[NCBI] 		226186 Bacteroidota > Bacteroidia > Bacteroidales > Bacteroidaceae > Bacteroides > Bacteroides thetaiotaomicron

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XXJ50028.1 [NCBI]
Genbank nucleotide accession
PV788059 [NCBI]
CDS location
range 2433 -> 4427
strand +
CDS
ATGAGTTGTAAGTATGACATTATCGACGAAGGCGGGCGTAAACGGGTAAGAGCGTTGCGCCACTTCACGGTACAAGGGCGGGACGTTTGCCCTATGGAACTAGGCGGATACGTCTACGACGCTAACACGTTGTCGCAGGACGGTAACTGTTGGATATTTAGCGGGTCACTGGAATACCCCGGTGTACGTGTTATGGACGAGGCTATCGTGGATATGGGGATCAATCTACCAAAGGACACCGCTAGACCTAAAGCTACTATCATCTCCGGTAATTCACGCATCATGGGAGCTATCTCATTTGAATCACGGTCGTTCAATGTGGCGCAGACCCCGGCGATGTGGGAACAAGGAGGCTTTAACATAACGGTGGGTAGTATCCCTATTAAATCGAATGCCACCACCCGTGTGCGTATTCAGGCACAATTGTTCGCCGGAACAGTGGGAACGGTAGCTATCACAAGCACCGCCTACGAAGCTAGGTTAATCTCATTGAACGAAGCCGGAATCGTAACATCGGCAACTGCTTGGACTGTTGGCGGTCCCGCTGTTACCTTGACTTCGACAGCACCATATATCCTTGTGGACCTACGCAAAGTAGGGGAAACAGCGATTACTCCGGCGGACGTGACCGCAGCAGGTGTCACGATAACACAGGCACGGGAAGCTACGGTACGCATATTTAATTCGTCTATTGTTCCGGTGTATAATGGTGCCGTGGCATCGGCAAGTAGAATCCTAGGTTACGAGGTTACAGACCCTAGCGGAAAACCATATCAAGTAAATATTCAAAATTCGTACCTACGTATTAAATGTAGCTTTGATAAGGCAAACCTAGTGAGAACGAATGCGGATTTTATCAAAGTTAATTACAATTTGGTAATTACACCGAACGAGACCCACTATATCTCAGGAACGTTCCGTAACACGAACATGAATACTCCGGCTAGTGTCAACGTAGTGGGGTACGCTAAGAGTCTTTTCGATGTATCAGATTGCCCGGACTTTGAGTTTTCGCCAGTTACGTTCCCCGACCTAGCCGCTATGATCGCATCCGGTAAGACGTTCTATTTTAAGCAGTGCAACATGCCCGTAGGTTCAGCGATCCATTACTACGACCCGAAGGTGAACACGTGGGATAACATCGACTTCACTAAGGCTATGGCTGACTTAGGGAAAAAGGCGTTCGCGGATACTACTATCGTATCATCCAATGTACAAGGGATGTACCGTGCCAGGGGAAACACTAGCGGCGTAATCGGTGGTCTGTTAGAGGCGGCGTCTAGCTTTGACAACGCGGCCTATATCGGCACAGCGGGTGCGACCTACGATTGCATCACCTACAAGGATTGCGTTGTCAAAGGTAAATTCACGATCAGAGGCCGCTGCGTATTTGGCGGTACACCGGGCGGCGCATCCAGGATTACCAACACAAAGGCAACGCCGATGGTGGTTGACGGATCATTCCGGATCGAAGGGAACGCACAAGTAACCGATACAACGCTTAAGGGTACAGGGTACATCGGCGGGAACGCAGAATTGAAGAACGGAATTGTAGAAGGTTACATTTATATGCAGGATAACGCGAAGTTCATCCCGGAAGCAGTTGCGAATCCGCCTGTGATTCGAAAGCTGATAATGTCCGGGAACACGAAAGTATTGAAGCAACGGGATGCAACATATAGCGATATGTGCCTAGTTATGTCGGATAATGCGATTCTTGACGCGGCTGTCGCAATCTTTGGAGACCTTATAATGATGGGCGATTCTCGTATCGTGCGACCCGGGTCAACTAACGCAGCTACCGTCTACGGGACCCTTGTACTAAAAGACAGAGCAAGTATAGAAGGAGATGTCTCGATAAACGCTAGAGGCGAGGTAAGCCTAGTGGGAAACTTCACCGCTGTGAGCGGACGAACTATCATAGGTAAGAAAACTATTTCGGATGTATCACAGATAGGCGAAACGGAGTTGCCGCCTATGAAACAAACTTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b5a16b2dd6207df9d3a028c6bbd546f24c2c257256dc538ab79b54a4afeeb4f2
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7365
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of Novel Phages infecting Bacteroides thetaiotaomicron Steczynska,J.P. and Williams,K.P. 2025-12-11 — GenBank