Protein

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Genbank accession
XHH73671.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MQAALQCEQLALQEQEHALQIEQARAKMQLEFLSLQSSLQAQKASTLNTLTQCQSMIKSLKDNAFINRANAYVSLLQVQANAPSGVTADNFENVLNTILEIGKEYNTISKNDKKVVYNDKEQTNELKTILNDLSNELEKLNKDSEMDQIQLFSDKLEVLKNAPARLWGFSTFNDATEGFYNEENEMIASGSVCLFRSDKVGKHTISFKAQKADKTLIKKITISVVENSLQNGA
Physico‐chemical
properties
protein length:233 AA
molecular weight: 26087,18640 Da
isoelectric point:5,24171
aromaticity:0,06009
hydropathy:-0,44592

Domains

Domains [InterPro]
DC_0626
STR
1–233
DC_0626
Coil
Unmapped
7–27
Coil Coil
XHH73671.1
1 233
Architecture
STR
STR 1-233
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Helicobacter phage Pt11444_1
[NCBI] 		3331674 Viruses > unclassified bacterial viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHH73671.1 [NCBI]
Genbank nucleotide accession
PQ159899.1 [NCBI]
CDS location
range 15015 -> 15716
strand +
CDS
ATGCAAGCAGCGTTACAGTGCGAGCAATTAGCCTTACAGGAACAAGAACATGCGTTGCAGATAGAACAAGCAAGAGCAAAAATGCAATTAGAATTTTTAAGCTTGCAATCCAGTTTACAAGCCCAAAAAGCAAGCACGCTAAACACGCTTACACAATGCCAGAGCATGATCAAATCTTTAAAAGATAACGCTTTTATTAACCGGGCTAACGCTTATGTGAGTTTGTTGCAAGTCCAAGCGAACGCGCCAAGCGGTGTTACAGCGGATAATTTTGAGAATGTTTTAAACACGATTTTAGAAATAGGCAAAGAATACAATACCATTAGCAAGAATGACAAAAAGGTAGTTTACAATGATAAGGAACAAACTAACGAGCTGAAAACGATTTTAAACGATTTGAGTAACGAATTAGAAAAGCTCAATAAAGATAGCGAAATGGATCAAATACAGCTTTTTAGCGATAAGTTAGAAGTATTAAAGAACGCGCCGGCTAGATTGTGGGGGTTTTCTACTTTCAATGATGCTACAGAGGGCTTTTATAATGAAGAAAATGAAATGATAGCGAGCGGTAGCGTGTGTTTGTTTAGAAGCGATAAAGTAGGGAAACACACTATTTCTTTTAAAGCCCAAAAAGCAGACAAAACATTGATTAAAAAGATCACTATTAGTGTTGTTGAGAATTCTCTGCAAAACGGAGCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a0f158efe960d1dac18a92dfbc71faf8059680a3e40023d265d6bae84bdc308e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7347
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Screening and in silico characterization of prophages in Helicobacter pylori clinical strains Ferreira,R., Pinto,G., Presa,E., Oleastro,M., Silva,C., Vieira,L., Sousa,C., Pires,D.P., Figueiredo,C. and Melo,L.D.R. — — GenBank