Protein

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Genbank accession
AUR90313.1 [GenBank]
Protein name
double jelly roll capsid protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MAFRSNKILPNFNGVGAGQTATLDVPIGSTYHQIAFEFSGMTTAQLTNFKVLLNGIPHIEIPSVAVLEQLNAFNGRGTTAGIFQLDFERFGLLTRQARELTAIGTGLGNSDPNQVRTFQIQVDIAAGASSPSLKATATTSPASFAGLVKKIRLFNRNPTGAGLFEISDLPKGDIINKVYFQSGEATSQIKKLTLEIDNYVKFERSNTLNNAIQKDDGVRVPQAKYSVFDPTELGYGAETVDTRYPMVEGNPRSGQNVSDMRFKLDMDGADNMLLLVEYLGTVER
Physico‐chemical
properties
protein length:284 AA
molecular weight: 30908,60350 Da
isoelectric point:5,80317
aromaticity:0,08451
hydropathy:-0,19648

Domains

Domains [InterPro]
IPR053751
STR
3–143
IPR053751 IPR053751
IPR041377
ATT
9–139
IPR041377 IPR057915
AUR90313.1
1 284
Architecture
ATT
STR
ATT 3-143 | STR 147-284
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.141.A._10N.261.49.B3
[NCBI] 		1881286 Viruses > Varidnaviria > Abadenavirae > Produgelaviricota > Belvinaviricetes
Host Vibrio kanaloae
[NCBI] 		170673 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR90313.1 [NCBI]
Genbank nucleotide accession
MG592512 [NCBI]
CDS location
range 5697 -> 6551
strand +
CDS
ATGGCTTTTCGTTCAAATAAAATTTTACCCAATTTCAACGGCGTAGGCGCGGGTCAAACCGCTACACTAGACGTTCCAATTGGTTCGACTTATCACCAAATCGCGTTCGAATTTTCTGGAATGACTACCGCGCAACTAACAAACTTTAAAGTTTTGTTGAACGGTATCCCACACATCGAGATTCCGAGTGTAGCGGTTCTAGAACAACTAAACGCTTTTAACGGTCGCGGCACCACTGCGGGTATTTTTCAACTCGACTTTGAACGTTTTGGATTGCTAACTCGTCAAGCTCGCGAGCTAACCGCTATTGGGACAGGCTTGGGTAATAGCGACCCGAATCAGGTTCGTACGTTCCAAATTCAAGTCGATATCGCGGCGGGCGCTTCGTCACCTAGTCTAAAGGCTACAGCGACAACTTCGCCTGCGTCTTTTGCTGGTCTGGTTAAAAAGATTCGTCTCTTCAACCGTAACCCGACGGGCGCAGGCTTGTTCGAAATTTCGGATTTACCTAAAGGCGACATTATCAACAAAGTGTATTTTCAATCTGGTGAAGCAACTTCGCAGATTAAAAAGCTTACACTCGAAATTGATAATTACGTTAAATTCGAGCGTTCAAACACACTAAACAACGCTATCCAAAAAGATGATGGTGTACGTGTCCCTCAAGCAAAGTATTCAGTTTTTGACCCCACAGAGCTAGGTTACGGAGCGGAAACCGTTGATACGCGCTATCCGATGGTTGAAGGTAACCCTCGAAGCGGTCAAAACGTTTCGGATATGCGCTTTAAGTTGGATATGGACGGCGCTGATAACATGCTTTTACTCGTTGAGTATCTTGGTACGGTTGAGCGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
19f6ccebdddf0b7fdc81dc9166a3cc812588125da36ebc580c30e357b04dd508
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8750
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank