Protein

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Genbank accession
AOV61724.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence RBPdetect
Probability 0,82
Protein sequence
MASHYSKERAKYGSGTGSIIVWPVELANTDPNSEDNISVLPAGYLKCDGTVYKADDYPQLAEILGVGSASKFIRYDIDNDAIDILNDDEFIVPDLGSKYPKPTTGAAAGSYLNIVTEDQNGNEKRRSGMGITATPTSGVTTGNTTVIQLSYVGTFAVPSHEIPLKGKPSWSKGTNNSGFTDQEAVDSLALHSHMHFSTTNRLRIKTTNEDNEPRSQGIGSYFTATTIPIQDWLDNTQYPNGGSSEGAGTNQPPCWAIASGQTSRSQPVETSTGFEVVYSNYCYDLAGSAGLNSLRYQCLLTSSTNFSLEDVDFAAPPNFVSFGLGLGSCNQLDQGSYNDTGTVPATYVTGATGVPNDWTGTSLSDVVPLNSNTQSKTQQSYPQVNNVFTEIEELVQNDGDPTIHSHKILLTQGTHTYKIKTNGFLLSPDNLQTTLTLQTDQVASLDQITSPYIIMEYLIKY
Physico‐chemical
properties
protein length:461 AA
molecular weight: 49760,13110 Da
isoelectric point:4,56738
aromaticity:0,08677
hydropathy:-0,41844

Domains

Domains [InterPro]
DC_1651
STR
2–295
DC_1651
IPR037053
ATT
6–95
IPR037053
IPR011083
ATT
17–65
IPR011083
SSF88874
STR
37–66
SSF88874
AOV61724.1
1 461
Architecture
ATT
STR
ATT 2-95 | STR 96-295 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AOV61724.1
1 461
Domain Start End Length (AA) Confidence
N-terminal 1 265 265 0,1022
Central domain 266 450 186 0,1350
C-terminal 451 461 10 0,9801
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-265
Central
266-450
C-terminal
451-461

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-WAM2
[NCBI] 		1815522 Uroviricota > Caudoviricetes > Pantevenvirales > Cymopoleiavirus > Cymopoleiavirus swam2
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOV61724.1 [NCBI]
Genbank nucleotide accession
KU686211 [NCBI]
CDS location
range 34874 -> 36259
strand +
CDS
ATGGCATCACATTACTCAAAAGAAAGAGCAAAATACGGATCTGGAACAGGTAGTATTATTGTTTGGCCAGTAGAATTGGCAAACACAGATCCAAATAGTGAGGATAATATCAGTGTTCTACCTGCTGGTTATCTAAAATGTGATGGAACTGTCTACAAAGCAGATGATTACCCACAATTAGCAGAAATTTTGGGTGTAGGATCTGCATCCAAATTTATTCGATATGACATTGATAATGATGCGATTGATATTCTCAATGATGATGAATTTATTGTTCCAGATTTAGGTTCTAAGTATCCAAAACCAACGACTGGTGCTGCTGCTGGATCTTACCTTAACATTGTTACTGAAGATCAAAATGGTAACGAGAAAAGAAGATCTGGTATGGGCATCACTGCTACACCAACATCAGGTGTAACTACAGGAAATACAACAGTTATTCAGTTAAGTTATGTTGGAACTTTTGCTGTTCCTTCGCATGAAATTCCACTGAAAGGAAAACCATCCTGGTCAAAAGGAACAAACAATAGTGGTTTTACTGATCAAGAAGCAGTTGACAGTTTAGCATTGCATTCGCACATGCACTTCTCAACCACAAATAGATTGAGAATTAAAACTACTAACGAAGATAATGAACCAAGATCTCAGGGTATTGGATCTTACTTTACTGCAACAACTATTCCAATTCAAGATTGGTTAGATAACACTCAATATCCTAATGGTGGCAGTAGCGAAGGTGCGGGCACAAACCAACCACCATGCTGGGCGATTGCATCTGGTCAAACTTCTAGATCTCAACCAGTTGAAACTAGCACAGGTTTTGAGGTTGTTTACTCTAACTATTGCTATGACTTGGCAGGATCTGCTGGTCTAAACTCATTAAGATACCAATGTTTGCTTACAAGTTCTACTAATTTTAGTTTGGAAGATGTTGACTTTGCTGCACCACCAAACTTTGTTAGCTTTGGTCTTGGACTTGGAAGTTGTAATCAATTAGATCAAGGTAGTTATAATGACACTGGAACTGTTCCCGCTACCTATGTAACTGGTGCAACTGGCGTTCCAAATGATTGGACAGGAACTAGTTTATCTGATGTTGTTCCATTAAATAGTAATACACAGTCGAAGACCCAACAATCATATCCCCAGGTGAATAATGTTTTCACTGAGATTGAAGAACTAGTGCAGAATGATGGTGATCCTACCATTCACTCACATAAAATTCTTCTTACTCAGGGAACACATACATATAAAATTAAAACGAATGGTTTCCTGTTGTCCCCTGACAATCTACAAACGACGTTGACACTGCAAACTGATCAAGTTGCTTCTCTTGATCAAATTACCAGTCCTTATATCATCATGGAATATCTAATTAAGTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3dc7c6734bdaae6ce42b3f587827e63674a53f23fd679f0c7dfef2f060fa3660
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3593
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50