Protein

View in Explore

Genbank accession

BFM93436.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect

Probability 0,86

Evidence RBPdetect2

Probability 0,96

Protein sequence

MSDTLDPALYYRISDLPDAAAITGAEVVEAIQGGKNVKFTLAQLMVAGKSAYQVAVDGGYSGTQAQWLASLVGAKGADGTNGKSAFELAQAGGYGGTQAQWLASLVGAKGDQGIQGIQGLKGDKGDKGDTGTSGSDGAAGKSAYELAVLGGFVGTQAQWLASLKGADGHDGTNGTNGADGAIGKSAYESAVAGGFVGSESAWVASLKGVKGDQGIQGIQGLQGNQGVKGDTGAKGADGTNGTNGTDGKSAYELAVAGGFVGTQAEYLASLKGPKGDDGADGAAGPQGPMGNGARLLGAVGDQASLPPVGESQEGDCYLIGPEFWALSGGVWTDLGNLQGPEGKSAYELALLAGFSGTEQDWMDSLHGSDGIGLKVLGSFQTVGDLPPGPEGNTAGDAFIIDAVMWVWDGTSWVPVGQVGPDGKSAYQLAKDAGLIPGTMTLSQWITSLNGKTAYQVAQANGFVGTQAAWLQSLVGKTAYQLALDSGFVGSQSAWLATLVGPQGPKGDKGDQGNVGPMGPGVKILGTVANSAALPGSSGTAGDMYIALDTLHGWAWTGSAFIDVGPVQGPQGLQGVQGIQGVKGDTGDKGANGDSAYTAAVAGGFVGTQAQWLASLQGVAGDSAYQTAVDNGFVGTQTQWLASLKGAKGDTGLTGPTGRGLVITGTVADQASLPATPPDQTAYIAGTHLFLFSSNAWQDLGPFIGPKGDQGIQGIQGVKGDKGDKGDKGDQGIQGIQGIQGVQGVKGDLGPGIKILGTFADSSQLPAHTTEAIGDGYLIQGHFWGWTGAAFEDLGMIQGPKGDQGLQGIQGVKGDKGDKGDTGNTGLQGIQGIQGVKGDKGDKGDTGANVKVLGTKPDTGSLPATGNTAGDAWTVAGHLWSWNGTVWVDAGQWKGDQGDQGLQGLQGDQGLQGIQGIQGLKGDKGDKGDQGDTGAMGPGVKILGTVATSSALPGSATNAGDMYIASDTLHGWAWTGTAFIDVGLIQGPKGDRGLQGLQGLQGVQGIQGLKGDRGDQGTRWIVLGRDPNPADGVVGDYFLNSSTLRFFQKTTTVAWSWLGFLGGGNVYDANLDDTMYVRENGAWVPLPAPVVGEAPLDHGVYIRKDGAWVQQAQAPNDAKAYVQKGGNWTDLATLATALAPNDSKAYVQKGGAWVDAATVTQTPAPNDTKAYVQKTGAWVDLSTLTDSKAPNDTKAYVQKGGNWTDLSTLTTVAAPNDTKAYVQKGGNWTDLATLATPLAPNDSAYYVAYNNGTTIGLKRLDRYDLPIAAATATLDLAVNQAFTVSAATAKTLAFANAPGANRAMTVVVCVTGNAAAITWPTISWSGGTAPTLGATYTNVILLWDGTKWTGSVGATA

Physico‐chemical properties

protein length:	1355 AA
molecular weight:	137086,11400 Da
isoelectric point:	4,60876
aromaticity:	0,07528
hydropathy:	-0,20207

Domains

Domains [InterPro]

DC_1725
STR
14–82

DC_1725 DC_1725 IPR008160 DC_2121 DC_1340 IPR008160 IPR008160 DC_0730 DC_0449

DC_0108
STR
73–135

DC_0108 DC_1725 IPR050149

DC_1473
STR
225–340

DC_1473 DC_1065 DC_1340

DC_1340
STR
721–827

DC_1340

BFM93436.1

1 1355

Architecture

STR

ATT

STR

RBD

STR 14-313 | ATT 314-415 | STR 437-918 | STR 926-1091 | RBD 1182-1355

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_1725	STR	DC_1725	14	82	Novel HMM	DC_1725	Central	Low	Positional only	85 proteins / 85 hits
DC_0108	STR	DC_0108	73	135	Novel HMM	DC_0108	Central	Low	Positional only	22 proteins / 22 hits
DC_1725	STR	DC_1725	120	183	Novel HMM	DC_1725	Central	Low	Positional only	85 proteins / 85 hits
DC_1725	STR	DC_1725	168	233	Novel HMM	DC_1725	Central	Low	Positional only	85 proteins / 85 hits
IPR008160	STR	DC_0536	208	248	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_1473	STR	DC_1473	225	340	Novel HMM	DC_1473	Central	Low	Positional only	59 proteins / 59 hits
DC_2121	ATT	DC_2121	314	415	Novel HMM	DC_2121	N-terminal	Low	Positional only	48 proteins / 48 hits
IPR050149	Unmapped	-	387	1016	InterPro	Collagen superfamily	-	-	-	-
DC_1340	STR	DC_1340	437	642	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
DC_1065	STR	DC_1065	616	750	Novel HMM	DC_1065	Central	Low	Positional only	109 proteins / 109 hits
IPR008160	STR	DC_0536	704	749	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_1340	STR	DC_1340	721	827	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
IPR008160	STR	DC_0536	797	848	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_1340	STR	DC_1340	818	918	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
DC_0730	STR	DC_0730	926	1091	Novel HMM	DC_0730	Central	Low	Positional only	37 proteins / 37 hits
DC_0449	RBD	DC_0449	1182	1355	Novel HMM	DC_0449	C-terminal	Low	Positional only	30 proteins / 30 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Ralstonia phage FLC1-1B [NCBI]	3157661	No lineage information
Host	Ralstonia pseudosolanacearum [NCBI]	1310165	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Genbank protein accession

BFM93436.1 [NCBI]

Genbank nucleotide accession

LC819005.1 [NCBI]

CDS location

range 147873 -> 151940
strand -

CDS

ATGAGTGATACACTCGATCCCGCACTGTATTACCGGATCTCTGACCTCCCTGACGCAGCAGCCATCACTGGTGCGGAAGTGGTCGAGGCCATCCAGGGTGGCAAGAACGTTAAGTTCACCCTGGCGCAGTTGATGGTGGCGGGTAAATCCGCTTACCAGGTCGCCGTTGACGGCGGCTATAGCGGCACGCAGGCTCAATGGCTTGCGTCGCTGGTCGGTGCCAAAGGTGCCGATGGTACGAATGGCAAATCCGCTTTCGAACTGGCGCAAGCCGGTGGTTATGGCGGCACGCAAGCCCAGTGGCTTGCCAGCCTTGTCGGCGCCAAGGGAGACCAGGGTATCCAAGGTATCCAAGGTCTTAAAGGTGACAAAGGTGACAAGGGCGATACCGGTACGAGCGGTTCGGATGGCGCAGCGGGTAAGAGCGCTTATGAACTCGCTGTACTGGGCGGCTTTGTCGGAACGCAAGCGCAGTGGTTGGCTAGCCTGAAGGGTGCGGACGGTCATGACGGTACGAACGGCACCAACGGCGCTGACGGCGCTATTGGTAAGTCGGCGTATGAGTCGGCTGTCGCTGGTGGTTTTGTCGGCTCTGAATCTGCCTGGGTTGCCTCGCTGAAAGGCGTGAAGGGCGATCAGGGCATTCAAGGTATTCAAGGCCTGCAAGGCAACCAGGGTGTCAAGGGTGACACCGGCGCGAAGGGCGCTGATGGCACGAACGGTACGAATGGTACGGACGGCAAGTCCGCCTACGAACTGGCCGTCGCTGGCGGTTTCGTGGGTACGCAAGCCGAGTACCTGGCCTCACTCAAGGGTCCGAAGGGCGATGACGGCGCTGATGGTGCTGCAGGCCCGCAAGGCCCGATGGGCAATGGCGCACGTCTGCTCGGCGCAGTGGGTGACCAAGCGTCGCTCCCGCCGGTTGGCGAATCGCAAGAAGGTGACTGCTACCTGATCGGACCGGAATTCTGGGCGCTCTCGGGTGGTGTGTGGACGGACCTCGGTAACCTGCAAGGGCCCGAAGGTAAGTCGGCCTATGAACTCGCGCTGCTCGCGGGCTTCAGCGGCACGGAACAAGACTGGATGGATTCGCTTCACGGCTCGGATGGTATCGGCCTGAAAGTGCTGGGTTCGTTCCAGACGGTGGGTGATCTCCCCCCGGGTCCGGAAGGCAACACCGCAGGTGACGCGTTCATCATCGATGCAGTGATGTGGGTGTGGGACGGCACGAGCTGGGTGCCGGTGGGTCAAGTGGGTCCGGATGGTAAGTCGGCCTACCAGCTCGCGAAGGATGCAGGTCTGATCCCGGGTACGATGACGCTCTCGCAGTGGATCACGTCGCTCAACGGTAAGACCGCCTACCAAGTCGCTCAGGCGAATGGTTTCGTTGGCACGCAGGCTGCCTGGCTGCAATCGCTGGTTGGTAAGACGGCGTATCAGCTCGCGCTGGACAGCGGCTTCGTCGGTTCGCAATCGGCCTGGTTGGCTACGCTCGTCGGTCCGCAAGGTCCGAAGGGTGATAAGGGTGATCAAGGTAACGTCGGCCCGATGGGTCCTGGCGTGAAAATCCTGGGCACCGTTGCCAACAGCGCAGCACTCCCGGGCAGCTCGGGTACGGCTGGTGACATGTACATTGCCCTGGATACGCTCCACGGCTGGGCATGGACCGGTTCCGCGTTCATCGACGTGGGTCCCGTGCAAGGTCCGCAAGGCTTGCAAGGTGTGCAGGGTATCCAAGGTGTCAAGGGTGACACCGGCGACAAGGGTGCAAACGGCGACTCCGCTTATACGGCGGCAGTGGCTGGTGGCTTTGTTGGTACGCAAGCACAATGGCTTGCGTCGCTCCAAGGTGTGGCAGGTGATTCGGCTTACCAGACGGCAGTCGACAACGGCTTCGTGGGTACGCAGACTCAGTGGCTCGCTTCGCTCAAGGGCGCAAAGGGCGACACGGGTCTGACGGGTCCGACCGGTCGTGGTCTCGTGATCACGGGCACGGTGGCAGATCAAGCTTCGTTGCCCGCTACGCCTCCGGATCAAACCGCGTACATCGCCGGCACGCACCTGTTCCTGTTCTCCAGCAATGCGTGGCAGGATCTCGGTCCGTTCATCGGTCCGAAGGGTGACCAAGGCATCCAAGGTATTCAGGGTGTCAAGGGCGATAAAGGCGATAAGGGAGACAAGGGCGACCAGGGTATCCAAGGGATTCAGGGTATTCAGGGTGTTCAAGGTGTGAAGGGTGACCTTGGTCCGGGTATCAAAATTCTCGGTACGTTTGCGGATTCCTCGCAGCTGCCCGCACACACCACCGAAGCCATTGGTGATGGTTACCTGATCCAGGGCCATTTCTGGGGCTGGACGGGTGCTGCGTTCGAAGACCTCGGCATGATTCAAGGTCCGAAGGGCGATCAGGGTCTGCAGGGTATTCAAGGCGTTAAAGGAGACAAGGGTGATAAGGGTGACACGGGTAACACCGGTCTCCAAGGCATTCAAGGTATCCAAGGCGTGAAGGGGGATAAGGGCGACAAGGGTGATACTGGTGCCAACGTCAAGGTCCTCGGCACCAAGCCCGATACTGGCAGTCTTCCGGCTACTGGCAACACCGCAGGCGACGCCTGGACGGTAGCAGGTCATCTCTGGTCGTGGAACGGTACGGTCTGGGTTGACGCAGGTCAATGGAAGGGTGACCAGGGCGATCAGGGTCTGCAAGGTTTGCAAGGCGACCAAGGTCTGCAAGGTATCCAGGGTATTCAAGGTCTGAAAGGCGACAAGGGCGACAAGGGCGACCAAGGCGATACGGGTGCAATGGGCCCGGGCGTGAAGATCCTCGGTACGGTGGCTACCAGCTCGGCTCTGCCGGGTTCGGCGACCAACGCTGGCGACATGTACATCGCTTCCGACACGCTGCATGGTTGGGCGTGGACGGGCACGGCGTTCATCGATGTGGGTCTGATTCAGGGTCCCAAGGGTGATCGCGGTCTGCAGGGCTTGCAAGGTCTGCAGGGCGTACAGGGTATCCAGGGTCTGAAGGGTGATCGTGGTGACCAAGGCACGCGCTGGATTGTGCTCGGTCGCGATCCGAACCCGGCTGACGGGGTGGTGGGCGACTACTTCCTCAACAGCTCGACGCTGCGCTTCTTCCAGAAAACCACCACGGTGGCCTGGAGCTGGCTCGGCTTCCTGGGTGGCGGTAACGTGTACGACGCCAACCTCGATGACACCATGTACGTTCGTGAGAACGGCGCATGGGTGCCGCTGCCGGCACCGGTCGTGGGTGAGGCTCCGCTGGATCACGGTGTGTACATCCGTAAGGATGGCGCATGGGTTCAGCAAGCGCAGGCACCGAATGATGCGAAGGCGTACGTCCAAAAGGGCGGAAACTGGACTGATCTCGCGACCCTCGCTACGGCACTCGCTCCGAATGACTCGAAGGCCTATGTGCAGAAGGGTGGTGCCTGGGTGGACGCGGCTACGGTCACGCAAACCCCTGCACCGAATGATACCAAAGCGTATGTCCAAAAGACTGGCGCTTGGGTTGACCTTTCGACGCTCACCGATTCGAAAGCCCCGAACGATACGAAAGCCTATGTTCAAAAGGGTGGTAACTGGACGGATCTGTCGACGCTTACCACGGTCGCTGCTCCGAACGACACCAAGGCTTACGTGCAGAAGGGTGGCAACTGGACTGACCTTGCTACGCTCGCGACGCCGCTGGCGCCGAACGACAGCGCCTACTACGTTGCGTACAACAACGGCACGACGATCGGTCTGAAGCGCCTGGACCGTTACGACTTGCCGATTGCTGCTGCAACGGCGACGCTGGACCTGGCTGTGAACCAGGCATTCACGGTGAGCGCGGCTACGGCCAAGACTCTCGCGTTTGCTAACGCACCGGGTGCCAACCGTGCGATGACGGTCGTGGTGTGCGTGACGGGTAATGCCGCAGCGATCACCTGGCCGACCATCAGCTGGAGCGGCGGTACGGCTCCGACGCTGGGCGCAACGTACACCAACGTCATCCTGCTCTGGGATGGTACGAAGTGGACGGGCTCGGTGGGCGCAACTGCCTAA

Genome Context

Tertiary structure

PDB ID

66e30d426bc43b81a5f1fc1f8a86f667edd084589ddaa4659e0e57fec168d8ac

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6385

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Complete genomic sequences of novel Ralstonia jumbophages isolated from leaf litter compost	Sasaki,R., Miyashita,S., Ando,S. and Takahashi,H.	2024-08-09	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature