Protein

View in Explore
Genbank accession
AUR95745.1 [GenBank]
Protein name
stabilization protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MQREIPLAANTSEQDISGNELLVNVYPRATTGGKYPFNLINTPGLAFFCELPTFPVLGLHENGEKAFAVTPTRMYEIFKDGSYSELGVVDLSGRVSIEDNGRQIVVVDGKKGFYWDGKTNEVLQITSNAFYPASSVTYQDGYFIFNRAGTGQFFISELLDVAFDPLDFATAEGQPDPLVYVLSDHREVFMFGTETIEVWYNSGASDFPFERNQGAFIEKGCGARHTIAKQNNTVYFVGSDLMVYQMTGYTPVRISNHAVEKTLKGVDLEDAFAYTYQDEGHLFYVLTIPGRDLTWCYDISTGAWHIRQSYHFGRHQSNNAIFFDSKTLVGDFQNGRIYQMASAWYTDDGQPVVREFVLPTVNNGREFLSVDSFELDMASGIGLIQGQGQDPKARLEFSKDGGKTWSNCKFADIGKIGEYLTRVKWNRLGAARQFTFRVRISDPVPIDIGGAYIEIR
Physico‐chemical
properties
protein length:456 AA
molecular weight: 51183,75000 Da
isoelectric point:5,00043
aromaticity:0,13596
hydropathy:-0,26404

Domains

Domains [InterPro]
DC_0229
STR
1–456
DC_0229
IPR021098
STR
19–455
IPR021098
AUR95745.1
1 456
Architecture
STR
STR 1-456
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR95745.1
1 456
Domain Start End Length (AA) Confidence
N-terminal 1 444 444 0,8213
Central domain 445 445 2 0,0031
C-terminal 446 456 10 0,9986
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-444
Central
445-445
C-terminal
446-456

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.211.B._10N.222.52.F11
[NCBI] 		1881453 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio tasmaniensis
[NCBI] 		212663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR95745.1 [NCBI]
Genbank nucleotide accession
MG592582 [NCBI]
CDS location
range 8473 -> 9843
strand +
CDS
ATGCAAAGAGAGATACCGCTTGCTGCCAACACTTCAGAGCAAGATATTTCAGGCAATGAGTTGCTTGTTAATGTTTACCCCAGAGCGACTACTGGCGGTAAGTACCCATTCAATTTAATTAACACGCCAGGGCTCGCATTCTTTTGCGAGCTTCCTACTTTTCCCGTTCTTGGTCTACATGAAAATGGTGAGAAGGCTTTCGCTGTCACTCCAACAAGAATGTATGAAATTTTTAAAGATGGTTCCTATAGTGAGTTGGGAGTCGTTGATTTATCTGGCCGGGTATCAATTGAGGATAACGGCAGGCAAATAGTAGTCGTTGATGGTAAGAAGGGGTTTTATTGGGATGGTAAAACAAACGAAGTGCTTCAGATAACTTCAAATGCTTTCTATCCAGCATCAAGCGTTACATACCAGGACGGATATTTTATTTTCAATAGAGCCGGGACTGGTCAGTTTTTTATATCAGAGCTTCTTGATGTTGCTTTTGATCCTCTTGATTTTGCCACCGCTGAAGGTCAGCCAGATCCGTTAGTTTATGTGCTAAGTGATCACAGAGAAGTCTTCATGTTTGGCACAGAGACTATCGAGGTTTGGTATAACTCCGGCGCTTCAGATTTTCCATTTGAGAGGAACCAGGGCGCATTCATAGAAAAAGGCTGCGGCGCTAGACATACGATAGCTAAGCAGAATAACACCGTTTACTTTGTCGGTTCTGACTTAATGGTTTATCAAATGACCGGGTACACTCCGGTTAGAATAAGCAATCACGCTGTAGAGAAGACACTAAAAGGCGTGGATCTTGAAGATGCTTTTGCTTACACATATCAAGATGAAGGGCATTTGTTTTACGTGTTAACCATACCAGGAAGAGATTTAACCTGGTGCTATGACATATCAACGGGCGCTTGGCACATAAGACAGAGCTATCACTTCGGTAGACACCAATCAAACAACGCTATATTTTTTGACTCTAAGACTCTTGTAGGTGACTTCCAAAATGGGCGTATATATCAAATGGCCTCAGCGTGGTACACCGATGACGGTCAGCCAGTAGTTAGAGAATTTGTATTGCCTACCGTTAATAATGGCCGTGAGTTCCTTAGTGTAGATAGCTTTGAGTTGGATATGGCTTCAGGTATTGGATTAATCCAAGGTCAAGGCCAAGATCCAAAGGCTAGGCTTGAGTTTTCAAAGGACGGCGGTAAAACATGGAGTAACTGCAAGTTTGCCGATATAGGTAAAATTGGTGAGTACCTAACTCGAGTTAAGTGGAATCGCCTTGGCGCAGCAAGGCAGTTCACCTTTAGAGTTAGAATTTCCGATCCGGTTCCTATTGATATAGGCGGCGCTTACATTGAGATTAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cb011cbb45f51c1381a937c08653919439bd0b83dd937e73da44070c229a1a89
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9093
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank