Protein

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UniProt accession
A0A8S5N821 [UniProt]
Protein name
Polysaccharide Lyase Family 6 enzyme, LYASE
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,87
Protein sequence
MKKKKIVVSVLLVCLLCVNLVSMAVKAETTSTIHSVSSWYDFKDAVQYSQDGDIIVVHGEIDLGTDVKIGSSSKHLTIKRGSADSRIAFEYINEAVTNITFDGGGIASSYSWITSKYETTFTNCKFNDFGNSENYSSSGSVGGAVKIQSGSCVFNDCTFENSYALAGGAIEIQGDSQVEINNCNIKNCGAVTCGGAIDNSSYAATCTITGGTITGNKANDFGGGVSNAGNTIITGTKVYANSSVNGGADIATKVSGVTTLTDTVEQLNELFSTDNFEVAGWVCDYDFDENIYIPDVDPTKENALLKLEYSEKQPETPEPTDPVDPSKPSEPSTDPSTEPSTPTDTEKPDETEPGTEPSETPEP
Physico‐chemical
properties
protein length:363 AA
molecular weight: 38461,73190 Da
isoelectric point:4,25380
aromaticity:0,07438
hydropathy:-0,33554

Domains

Domains [InterPro]
IPR011050
STR
27–259
IPR011050
IPR011050
STR
27–250
IPR011050
IPR012334
STR
35–292
IPR012334
A0A8S5N821
1 363
Architecture
STR
STR 27-292 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5N821
1 363
Domain Start End Length (AA) Confidence
N-terminal 1 27 27 0,1724
Central domain 28 352 326 0,8574
C-terminal 353 363 10 0,0865
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-27
Central
28-352
C-terminal
353-363

Taxonomy

  Name Taxonomy ID Lineage
Phage Myoviridae sp. ctdsp2
[NCBI] 		2826672 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD90408.1 [NCBI]
Genbank nucleotide accession
BK015085 [NCBI]
CDS location
range 11426 -> 12513
strand +
CDS
ATGAAGAAAAAGAAGATTGTGGTCAGTGTGCTATTGGTATGCCTGTTGTGTGTGAATTTGGTGAGTATGGCAGTCAAAGCAGAAACAACATCAACTATTCATTCTGTATCAAGTTGGTATGATTTCAAGGATGCAGTACAGTATTCACAGGATGGTGATATAATTGTTGTTCATGGTGAAATTGATTTAGGTACTGATGTTAAAATCGGCAGCAGTTCCAAGCATTTGACCATAAAGAGAGGTTCAGCAGATAGCCGTATTGCTTTTGAATACATCAATGAAGCGGTAACGAATATAACATTTGATGGTGGTGGGATTGCTTCATCCTATTCTTGGATAACAAGCAAGTATGAAACAACTTTCACAAATTGCAAGTTCAATGATTTTGGAAATAGTGAAAATTATTCAAGTAGCGGGAGTGTTGGCGGTGCGGTAAAAATTCAGTCAGGTTCATGCGTGTTCAATGATTGTACTTTTGAAAACAGTTATGCCCTTGCGGGCGGTGCTATTGAAATACAGGGGGATTCACAGGTTGAAATCAATAACTGCAATATAAAAAATTGCGGTGCAGTTACTTGTGGCGGTGCTATTGATAACAGCTCGTATGCTGCAACCTGTACGATAACAGGCGGGACAATAACAGGAAACAAGGCGAATGACTTTGGTGGTGGTGTATCTAATGCCGGAAATACAATTATTACAGGAACAAAAGTGTATGCAAACAGTTCAGTGAATGGCGGTGCTGATATTGCAACCAAGGTTTCAGGTGTGACAACATTGACAGATACAGTTGAACAACTCAATGAACTGTTCAGTACGGACAATTTTGAAGTTGCCGGGTGGGTCTGTGATTATGATTTTGATGAAAATATTTATATTCCTGATGTAGACCCAACAAAGGAAAATGCGCTGCTGAAATTGGAATATTCAGAAAAGCAGCCGGAAACACCTGAACCAACAGACCCGGTTGACCCGTCAAAGCCTTCCGAACCGTCAACTGACCCGTCAACAGAGCCATCAACACCAACAGACACGGAAAAGCCGGATGAAACCGAACCCGGAACAGAACCAAGTGAAACACCTGAACC

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0016829 lyase activity Molecular Function IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
dc1d39ba06e545a708a3e3520d81f96905b3ec788ce09bdb1d9c1a2c16151be2
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8530
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50