Protein

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Genbank accession
XYO02470.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MFWVKAFGEVVNTGILDAGTLSQDLQQLRSKAQQLEQSFNQTKSETDSRIKIIENKLNTEKASNIVWSGNVTQNSANVLELSESILNKTLIFYLQVSQGHSLQQNVDTNTMSVFVDEKLLEVNGRKYIHFVFYLGGWKSVQIEIIEDRKIKIIEASNMYIKQITAI
Physico‐chemical
properties
protein length:166 AA
molecular weight: 18916,33910 Da
isoelectric point:6,13272
aromaticity:0,08434
hydropathy:-0,22108

Domains

Domains [InterPro]
DC_0818
RBD
1–166
DC_0818
Coil
Unmapped
18–45
Coil
XYO02470.1
1 166
Architecture
RBD
RBD 1-166
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pasteurella phage Pmp3
[NCBI] 		3127679 Viruses >
Host Pasteurella multocida
[NCBI] 		747 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pasteurellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYO02470.1 [NCBI]
Genbank nucleotide accession
OR544134.1 [NCBI]
CDS location
range 2137 -> 2637
strand -
CDS
GTGTTTTGGGTTAAAGCATTTGGTGAGGTCGTTAATACCGGAATATTAGACGCGGGTACTTTATCGCAAGACTTACAACAACTTAGAAGTAAAGCTCAGCAACTCGAGCAATCTTTCAATCAAACCAAGTCTGAGACAGACTCTAGAATTAAAATAATTGAGAATAAACTGAACACAGAAAAAGCAAGTAATATCGTCTGGTCCGGGAATGTCACTCAAAACTCAGCAAATGTGCTTGAGCTGTCAGAATCTATTCTAAATAAGACGCTTATTTTCTATTTGCAAGTGTCGCAAGGACATTCGTTACAGCAAAACGTTGATACGAATACGATGTCTGTTTTTGTAGATGAGAAGCTTCTTGAAGTAAATGGTAGGAAATACATTCATTTTGTTTTTTATCTTGGTGGCTGGAAAAGCGTTCAAATAGAAATCATTGAAGATAGGAAGATAAAAATCATTGAAGCATCAAATATGTATATAAAACAAATAACTGCAATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c7bcd1fee6eee973df7c6369017676d06ba3a1c6622201d6e7885e57c0c73784
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8686
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50