Protein

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Genbank accession
AUR98934.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTKKFGTNVYAPVVAGDDTEDDAVAAYGDELGRTIHHFDTEKEKDTFTGKFKSRLYKSWCVVKDSSAWYEWTGVQEDGTDGAWSELDLGSPSSAGVTLKGAGKQAAGVTEITVAEGLELVPDKDDSTKAIVRIAPQVFGQGTPSAYLAGMTKDKIITAADSDAIVFYDMSMTEAGTGIEVDVDKYGIQDPTFDDPNVTGGTPTEVLATIGFNGSAPEDGRITFSVKLKQAGQVEAYLKNPNGKVVVYARDVKQGQELKPMFLAGLVQAKGIEYIRFHVSHTFKNSDLVIDHTQAFMCFQQLTGSWRTSVARNTFEQKAGITFTPMIEHFGENILSADHEFKNDIALRGLNSYSGWDDLDIIGLRNLTKVQAGVDGGKLIVKNDGVSVTDFMVDMAADHHKTRMLRGHNVRFDFELVDKNNGWNLGLFAWTGEADKFGDLYSTRTNGAINLNANFTQITNTFISEDAISGVHKVSVSGVVPDSANNVIAFLYPIQAQAPITLQIQSASMSTAPFTAYMETSPILASELHLHFSEAYTRFVQNTQGYASLRYTYNAAEQPAPTGIQFKGKAPITIDTAANQVGGSQARGGEGAYKFNFAGTVSISVSASASNETGNDSTMALFFRKVNPDNTLGDEIPGSRVTWTIKAGDKNVEHGLPAFLLDVVTGDRIAPRVLESAVDGGYLECDNDRQPLIETIFDIKKLTP
Physico‐chemical
properties
protein length:703 AA
molecular weight: 76192,29710 Da
isoelectric point:4,95951
aromaticity:0,09246
hydropathy:-0,25306

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR98934.1
1 703
Domain Start End Length (AA) Confidence
N-terminal 1 177 177 0,9742
Central domain 178 376 200 0,1990
C-terminal 377 703 326 0,9684
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-177
Central
178-376
C-terminal
377-703

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.257.O._10N.286.46.A4
[NCBI] 		1881445 No lineage information
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR98934.1 [NCBI]
Genbank nucleotide accession
MG592623.1 [NCBI]
CDS location
range 19632 -> 21743
strand +
CDS
ATGACTAAGAAGTTTGGAACAAACGTGTATGCTCCAGTGGTTGCGGGCGATGATACGGAAGACGATGCGGTGGCGGCATATGGTGACGAGCTGGGGCGCACCATTCATCACTTTGACACTGAAAAAGAAAAAGACACTTTCACGGGTAAGTTTAAAAGCAGACTGTATAAATCTTGGTGTGTGGTCAAGGATTCGTCAGCTTGGTATGAGTGGACAGGCGTACAAGAAGACGGAACAGACGGCGCATGGAGTGAGCTTGATCTTGGTTCGCCATCATCAGCAGGAGTCACGCTCAAAGGTGCAGGAAAGCAAGCAGCTGGAGTTACCGAAATAACAGTGGCGGAGGGATTGGAGCTTGTGCCGGATAAGGATGACAGCACAAAAGCAATCGTAAGAATTGCGCCGCAAGTATTTGGACAAGGCACACCAAGCGCATATCTAGCAGGGATGACGAAAGACAAGATAATAACAGCGGCGGATTCTGACGCGATTGTTTTCTATGACATGTCAATGACGGAAGCGGGAACGGGAATAGAAGTTGATGTGGATAAGTACGGAATCCAAGACCCGACATTTGACGATCCTAATGTAACAGGCGGTACGCCTACGGAAGTTCTGGCAACCATTGGATTTAATGGAAGCGCACCGGAAGATGGTCGCATAACGTTTTCTGTCAAGCTCAAACAGGCAGGGCAAGTGGAGGCGTATCTTAAAAATCCAAATGGAAAGGTTGTTGTTTATGCTCGGGATGTAAAGCAAGGGCAAGAGCTAAAGCCAATGTTCTTGGCGGGATTGGTGCAAGCAAAAGGAATTGAATACATCCGCTTCCATGTGTCGCACACGTTCAAAAACAGCGATCTTGTTATCGACCATACGCAAGCGTTCATGTGCTTCCAGCAATTAACGGGCAGTTGGCGCACATCGGTAGCCAGAAATACATTTGAACAAAAGGCAGGCATTACGTTTACTCCAATGATTGAGCATTTTGGGGAAAACATCCTAAGTGCAGATCATGAGTTTAAAAATGACATTGCACTGAGGGGGCTTAATTCTTATTCGGGCTGGGATGATTTAGATATTATCGGGCTGCGCAATCTAACTAAGGTGCAAGCTGGGGTTGATGGTGGAAAGCTAATAGTCAAAAATGATGGCGTGAGCGTTACGGATTTTATGGTTGATATGGCAGCAGATCACCATAAGACAAGAATGCTACGCGGTCACAATGTGCGCTTTGACTTTGAGCTGGTGGACAAGAACAACGGCTGGAATCTTGGCTTGTTTGCATGGACTGGAGAGGCTGATAAATTTGGGGATTTATACAGCACCAGAACCAACGGAGCGATAAACCTAAACGCTAACTTTACTCAGATAACAAACACTTTCATTAGTGAGGATGCTATATCCGGCGTTCATAAAGTTAGTGTTTCCGGTGTTGTTCCAGATAGCGCAAACAACGTGATTGCATTCCTTTATCCAATACAAGCTCAAGCACCAATCACACTGCAAATACAATCAGCCTCCATGAGTACGGCACCGTTCACGGCATACATGGAAACATCGCCAATATTGGCAAGTGAGCTGCATTTGCATTTCTCGGAAGCGTACACGCGCTTTGTGCAGAACACGCAGGGTTATGCAAGCTTACGATACACATACAACGCAGCAGAGCAGCCAGCACCAACAGGCATTCAATTCAAAGGTAAAGCGCCGATTACCATTGATACAGCCGCAAACCAAGTAGGGGGAAGTCAAGCGCGCGGCGGCGAGGGCGCATACAAGTTTAACTTTGCTGGTACGGTTAGCATTTCAGTAAGTGCGAGCGCATCAAATGAAACTGGCAACGATTCAACCATGGCGCTATTTTTCCGCAAGGTAAATCCAGACAACACTCTAGGCGATGAGATTCCAGGCAGTCGAGTAACATGGACAATCAAAGCGGGAGATAAAAACGTTGAACACGGGCTACCAGCGTTCTTGCTTGATGTTGTAACGGGTGATCGCATTGCGCCGCGTGTGCTAGAGAGTGCGGTAGACGGTGGGTATCTGGAATGTGACAACGACCGTCAGCCGCTGATAGAAACAATATTTGATATCAAAAAGCTAACACCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0c63046adff1788b65de16ce216c746886bb594c3b3998152dd7daf4b19c0644
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5241
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank