Protein

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Genbank accession
ATN94107.1 [GenBank]
Protein name
putative major tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,56
Protein sequence
MLLPNGAQIFVETSRGEDSEATAITNAGNLVATVASKGDLVKGVYVIVTQSTWAKMVSRGLIVTAAPETSITLAGIDTSDTLVFPAGGTMSFAKITGWTEIPCVQEIGQDRGEQQNYTYQCLSDDKEKQIPTFKSGISLTYTFAHEFDNPIYPILRKQDSSGQVTAVRMYVPKANKMRMWAGIWSFNDIPSTQVNEMETVQLAVSQKGDFTFVSSALARPGA
Physico‐chemical
properties
protein length:222 AA
molecular weight: 24090,03890 Da
isoelectric point:5,06915
aromaticity:0,08559
hydropathy:-0,10766

Domains

Domains [InterPro]
DC_0037
ATT
1–50
DC_0037 IPR014918
ATN94107.1
1 222
Architecture
ATT
TAS
ATT 1-50 | TAS 51-214 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ATN94107.1
1 222
Domain Start End Length (AA) Confidence
N-terminal 1 215 215 0,6048
Central domain 216 215 1 0,0340
C-terminal 216 222 6 0,9818
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-215
Central
216-215
C-terminal
216-222

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage vB_SflS-ISF001
[NCBI] 		2048005 Uroviricota > Caudoviricetes > Drexlerviridae > Tunavirus > Tunavirus ISF001
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATN94107.1 [NCBI]
Genbank nucleotide accession
MG049919 [NCBI]
CDS location
range 25136 -> 25804
strand -
CDS
ATGCTCTTACCAAATGGCGCGCAAATTTTCGTGGAAACCTCTCGCGGAGAAGATAGTGAGGCAACCGCTATTACTAACGCAGGAAATCTTGTTGCTACAGTTGCATCTAAGGGCGACTTAGTAAAAGGCGTTTACGTTATTGTAACTCAGTCAACCTGGGCCAAGATGGTCAGTCGAGGGCTGATTGTTACTGCCGCTCCGGAAACAAGCATCACTCTCGCTGGGATTGACACCTCTGATACTCTTGTTTTCCCGGCTGGCGGCACGATGAGCTTTGCAAAGATTACTGGCTGGACTGAGATTCCTTGCGTACAGGAGATTGGTCAGGACCGCGGCGAGCAGCAGAATTATACTTATCAGTGCTTGTCCGATGATAAAGAAAAGCAGATCCCAACGTTTAAATCTGGGATCTCGCTAACTTACACATTCGCGCACGAATTTGATAACCCGATCTACCCTATTCTGCGTAAGCAGGATTCTTCTGGTCAGGTAACTGCGGTTCGGATGTATGTTCCAAAAGCGAACAAGATGCGCATGTGGGCTGGTATCTGGTCTTTTAACGACATTCCATCTACGCAAGTAAACGAAATGGAAACGGTACAACTCGCCGTATCCCAGAAGGGTGATTTCACTTTCGTTTCATCCGCTCTGGCACGACCTGGTGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f1ee17a629665ea9edea5b4b5455ead37a6f714d940d075a4a4ba57c776a0696
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9224
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative genomic analysis of a novel S. flexneri bacteriophage vB_SflS-ISF001 Shahin,K., Bouzari,M. and Wang,R. 2019-04-05 — GenBank