Protein

View in Explore
Genbank accession
YP_009613531.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,56
Protein sequence
MPPAIIGAAIAIGASAAAAAGWIATGVALAIGMTATVAGALLTKTPNTNFNAYKGQQERKQVLRAAAAARTVVYGTTVASGVMTFAEEQPGDQDEDELLHMALVVASHPLEGIGDIWLGDDLIQTFEQYVSWEFHNDRQTVDPFMRDNCPSWKDDMIGKGIAWLRISFKFNAEKFPSGLPNIKLLKRGRRVYDPRSGYTVFSDNAALVILDYFRTYLKRSDEHINWEQFKEAANICDEYVSNADGSTERRYRINGEFEVDEAPAKILDAMLQACGGELTYIAGKHGLLVGAYYGPATMTLDESCISGDIKIIPETSYKERTNTITGTFIDPKQNYVEADFPPVVVKEWVEKDGAGITQDMDFRFVTSEYQAQRLSNIILRRKRVGRTIEIPCNMKGYKFRPGMYVKVTISQIGMRNVEMRVTKWSFNPKGGVDITLRQDFLEMWDDAIGKPMDRPDLVDLPSGGVAQPQNLQYQILQISDVVQGVLSWTNMGQVAYNRVAVRQGGVTIWTAQVPGQSVRVTGLLRGAYTAHVQAVSHGGAISPEAYLEFNIQAPPPPSSVEVQNGYFSLTLIPKISELTSVSTQFDFWTSGETKLSSTNTDVVERDATREGMGTVWQKNNLLNDHVYYWYVRTINAFGSSSFVEVEARVWAETGQIIEIMDKEFQETETFKNLMETVQKVDDGVTELSKVVEGQASKIDSVQTSVGDVVVTVQQQSQALADLNGKLSAQWGQKVQIDSNGNKYVAGMQLGIEGSGGQFQSYFMVSADNFAVYNPVAGAAQLAFAIKNGQAFLRDGFIENGSITNAKIGNVIQSNNWNGNDQGWAITKDGYCVFNNVTVRGTVVANAGQFGFNGNGGITIDSNGIRVPLSGGGVVIVGRW
Physico‐chemical
properties
protein length:879 AA
molecular weight: 96466,67440 Da
isoelectric point:5,12934
aromaticity:0,09556
hydropathy:-0,20603

Domains

Domains [InterPro]
DC_0187
STR
1–839
DC_0187
IPR057587
ATT
556–661
IPR057587 IPR053171
IPR000727
STR
660–722
IPR000727
IPR015406
RBD
711–848
IPR015406
YP_009613531.1
1 879
Architecture
STR
ATT
STR
STR 1-555 | ATT 556-661 | STR 662-848 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SE1 (in:Nonagvirus)
[NCBI] 		2115848 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009613531.1 [NCBI]
Genbank nucleotide accession
NC_042025.1 [NCBI]
CDS location
range 733 -> 3372
strand -
CDS
ATGCCACCAGCAATAATTGGAGCGGCAATTGCAATTGGTGCATCTGCTGCGGCAGCAGCGGGATGGATTGCGACAGGTGTAGCTTTAGCTATCGGTATGACCGCAACCGTAGCTGGCGCACTATTAACTAAGACACCAAATACAAATTTCAATGCTTATAAAGGTCAACAGGAGCGTAAACAAGTATTACGTGCCGCGGCAGCAGCCAGAACTGTCGTATATGGTACAACTGTAGCTTCTGGAGTCATGACTTTTGCAGAAGAACAGCCCGGTGACCAAGATGAAGATGAACTTCTCCATATGGCGTTAGTTGTTGCGTCACATCCATTGGAAGGAATTGGAGATATTTGGCTTGGGGATGACCTTATTCAAACTTTCGAACAATACGTCAGCTGGGAATTTCATAACGACCGTCAAACTGTAGACCCGTTTATGCGGGACAATTGTCCTTCCTGGAAGGATGATATGATTGGTAAAGGTATTGCTTGGCTTCGTATTAGTTTCAAATTTAATGCTGAAAAATTCCCTTCTGGTTTACCAAATATCAAACTTCTAAAACGAGGACGACGTGTATATGACCCTAGATCTGGCTATACTGTGTTCAGTGATAACGCAGCATTAGTTATACTGGATTATTTCCGAACATATTTGAAACGTAGCGACGAACATATTAACTGGGAGCAGTTCAAAGAAGCTGCGAATATATGTGACGAATATGTTTCTAACGCAGATGGTTCCACGGAGCGACGCTATAGAATCAATGGAGAATTCGAAGTAGATGAAGCACCTGCTAAAATCCTTGATGCAATGTTGCAGGCTTGCGGCGGGGAATTGACATATATAGCCGGTAAGCACGGATTATTGGTCGGTGCATACTATGGTCCAGCAACAATGACTCTGGACGAAAGTTGTATTTCCGGTGATATTAAAATCATCCCGGAGACATCCTATAAGGAACGAACTAACACAATCACTGGTACATTCATAGATCCTAAACAGAACTATGTTGAAGCCGACTTTCCTCCTGTTGTGGTCAAAGAATGGGTGGAAAAAGATGGTGCAGGAATAACCCAGGATATGGATTTCCGATTTGTAACAAGCGAATATCAAGCCCAACGTTTATCCAATATTATTTTACGTCGTAAACGTGTTGGTCGCACAATTGAAATTCCTTGTAACATGAAAGGTTATAAGTTTCGACCAGGAATGTATGTAAAAGTTACTATTTCTCAGATAGGAATGAGAAATGTCGAAATGCGAGTAACTAAATGGTCTTTCAACCCTAAAGGTGGAGTAGACATTACTCTACGACAAGATTTCCTGGAAATGTGGGACGATGCTATCGGTAAACCGATGGACCGCCCAGATCTTGTAGATTTACCAAGTGGCGGTGTTGCTCAACCACAAAATCTACAGTACCAGATTTTGCAGATTAGCGATGTGGTACAGGGTGTGTTATCCTGGACTAATATGGGGCAAGTGGCGTACAACCGCGTAGCCGTGCGACAGGGCGGTGTAACTATTTGGACCGCACAAGTCCCAGGACAAAGTGTTAGAGTTACTGGTCTGTTACGTGGTGCGTATACAGCGCACGTCCAAGCTGTGTCACACGGTGGGGCAATATCCCCTGAGGCTTATCTTGAATTTAATATTCAAGCTCCACCACCACCTTCTTCTGTCGAAGTACAAAACGGTTATTTTTCTTTAACACTTATTCCAAAAATTTCTGAACTTACTAGCGTCAGCACTCAGTTCGATTTCTGGACATCAGGTGAAACAAAATTATCATCCACCAATACGGATGTTGTTGAACGAGACGCTACTCGTGAAGGTATGGGTACTGTATGGCAAAAGAACAATTTGCTCAATGACCACGTTTATTACTGGTATGTTCGCACAATCAATGCCTTCGGATCGTCTTCGTTTGTTGAAGTGGAAGCCCGGGTATGGGCGGAAACTGGGCAAATCATTGAAATCATGGATAAGGAGTTTCAGGAGACTGAAACTTTCAAAAACCTCATGGAGACTGTACAGAAAGTCGACGACGGCGTCACAGAATTGTCCAAAGTTGTAGAAGGGCAAGCCTCCAAGATTGATTCAGTGCAGACTAGCGTTGGCGATGTTGTGGTTACAGTTCAACAACAATCCCAAGCATTAGCAGATCTTAATGGTAAACTTTCTGCTCAATGGGGGCAAAAAGTTCAGATTGATAGTAACGGTAATAAATATGTCGCCGGTATGCAGTTAGGTATAGAAGGTAGCGGAGGTCAATTCCAATCTTACTTCATGGTGAGTGCGGATAACTTTGCTGTTTACAACCCTGTAGCTGGAGCTGCTCAACTTGCGTTTGCTATTAAAAACGGTCAGGCGTTCTTGAGAGATGGTTTTATTGAAAATGGTTCAATTACAAATGCTAAAATAGGTAATGTGATTCAGTCCAATAACTGGAATGGGAACGATCAAGGGTGGGCAATTACAAAAGACGGTTATTGCGTATTTAATAACGTTACCGTCAGAGGGACGGTCGTTGCTAACGCTGGTCAATTTGGTTTCAACGGAAATGGGGGTATTACAATTGATAGTAATGGTATCCGCGTCCCGTTATCCGGTGGGGGTGTTGTCATAGTAGGACGCTGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
7bd42a5fad7ffd0feffc759d3e7c7941b4b5fbf30065d46af2b741cf9844ad94
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7895
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Lytic Bacteriophage SE1 Infecting Salmonella Enteritidis Isolates Kim,D., Kim,Y.J., Han,B.K. and Kim,H. 2012-09-15 — GenBank