Protein

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Genbank accession
XNL98011.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MDQDIKTVIQYPVGATEFDIPFDYLSRKFVRVSLVSDDNRRLLSNITEYRYVSKTRVKLLVETTGFDRVEIRRFTSASERIVDFSDGSVLRAADLNVSQIQSAHIAEEARDAALMAMPQDDAGNLDARNRRIVRLAPGIAGTDAVNKDQLDTTLGEAGGYLEDMKELDRIIRDFIENFANDPASLRGVVWMYNAGSAIGGETSVVITKPGDVLAVPCLYINGSRQDVGVTYDYDNRTKTITFKGSRKLQQNDLLIAVTAEGSIPLADILMSLDGAKYVMTSQGVSVEAAIRGIRGNVKSLLDLYRAEDGDDYAPAATRALAQGNALYIPVGRWTFKSTVQIPAGTAIFGSGHKSIIASPEASDAAGSALITVLRADNVGNISLKDFKVDGGSGSAHTVKKNVRGVRFYKCNNIRVDGVEVSRTADWATSFEQCSEVYVDGYKHRRSESPLHGGRDGLHFLDCNGFMATNLDIESHDDCVGITSETLGTFDGHVDGVRGTSTLGSLVIYNEETSGGAYIPMPMRGLRIDNVFPKEGQSVRQLVRVAAYASTSDARDVIISNVQGNVTASHGVQVQNVKNVFLDNVDAHVVSSSSHGVYISNCDVVRGNVSGTTSASTHDGVQVFNSKNVELDITSRASAGNAAQINGCTNVRVVPLFSSAGAAGLRITGSTNVDVPSGTFSGTFPGLCINQTGNTNLFIAATILYDTASGRINSPVASMFMDIPAVIISAKEAADGTLTVYRAIGGTITRLATGRYQITFTNPMQTAQFTFTMTAAHPGSVRQAYTASAIGTDGLTLGVKDSAGTDIHSEYIRFIAYNY
Physico‐chemical
properties
protein length:818 AA
molecular weight: 87681,25860 Da
isoelectric point:5,62561
aromaticity:0,07213
hydropathy:-0,11198

Domains

Domains [InterPro]
DC_0778
STR
1–448
DC_0778 IPR011050
IPR005604
ATT
3–127
IPR005604 IPR012334
IPR011050
STR
318–520
IPR011050 DC_0499
IPR000743
ENZ
391–485
IPR000743
XNL98011.1
1 818
Architecture
ATT
STR
ATT 1-127 | STR 128-818
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNL98011.1
1 818
Domain Start End Length (AA) Confidence
N-terminal 1 311 311 0,9960
Central domain 312 718 408 0,9944
C-terminal 719 818 99 0,9869
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-311
Central
312-718
C-terminal
719-818

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage RAD13
[NCBI] 		3389929 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae ATCC 43816
[NCBI] 		1316582 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Klebsiella > Klebsiella pneumoniae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNL98011.1 [NCBI]
Genbank nucleotide accession
PQ803403.1 [NCBI]
CDS location
range 25065 -> 27521
strand +
CDS
ATGGACCAAGACATTAAAACAGTCATTCAGTACCCAGTAGGGGCCACTGAGTTCGACATCCCGTTCGACTACCTGTCCCGTAAGTTTGTCCGTGTGTCGCTGGTGTCAGACGACAACCGCAGACTGCTGAGTAACATCACTGAGTACCGCTACGTGTCTAAGACCAGAGTGAAGCTCCTTGTGGAAACTACCGGGTTCGACCGTGTGGAAATCCGCAGGTTCACCTCAGCGTCTGAGAGAATCGTTGACTTCAGCGATGGCTCGGTTCTCCGCGCTGCTGACCTTAACGTATCTCAAATACAGTCGGCGCATATCGCAGAGGAAGCACGTGACGCGGCACTCATGGCCATGCCACAGGATGACGCTGGGAACCTCGATGCGCGCAACCGTAGAATCGTAAGGTTGGCACCGGGTATCGCCGGGACGGATGCAGTGAACAAGGACCAGCTTGACACAACCTTAGGAGAGGCTGGTGGGTACCTTGAAGATATGAAGGAACTCGATAGGATTATACGGGACTTCATTGAAAACTTCGCCAACGACCCGGCGTCCTTGCGTGGAGTCGTGTGGATGTACAACGCTGGGTCTGCCATTGGTGGGGAGACTTCGGTAGTAATCACCAAGCCGGGAGATGTTCTCGCTGTTCCGTGCCTGTATATCAACGGGTCTCGTCAGGATGTTGGGGTTACGTACGATTATGATAATCGGACCAAAACCATCACCTTCAAGGGTAGCCGTAAGTTACAGCAGAACGACCTGCTGATTGCCGTAACAGCTGAGGGCTCAATCCCGCTTGCCGACATCCTCATGAGCCTAGATGGTGCTAAGTACGTTATGACCTCGCAGGGTGTTAGCGTAGAGGCTGCTATTCGCGGCATCCGAGGTAACGTTAAGTCTCTGCTGGACCTGTATCGTGCAGAGGACGGTGATGACTACGCTCCGGCAGCAACAAGAGCATTAGCTCAAGGTAATGCGTTGTACATCCCAGTAGGTCGATGGACATTTAAATCCACCGTACAGATTCCAGCAGGTACAGCAATATTCGGGTCCGGCCATAAGTCCATCATTGCGTCTCCTGAGGCTTCAGATGCAGCTGGTAGTGCGCTGATTACTGTTCTACGGGCAGACAACGTTGGTAACATTTCTCTGAAGGACTTCAAGGTAGACGGAGGGTCAGGCTCTGCCCACACAGTTAAGAAGAATGTTCGCGGTGTTCGCTTCTATAAGTGTAACAACATCCGAGTAGATGGTGTCGAGGTGTCTCGAACAGCAGACTGGGCGACCTCCTTTGAGCAGTGCTCCGAGGTTTACGTTGACGGCTATAAGCATCGACGCTCTGAGAGTCCACTGCACGGTGGCCGAGACGGTCTCCACTTCTTGGACTGTAATGGGTTCATGGCAACCAATCTGGACATCGAGTCTCATGACGACTGTGTAGGTATTACCTCTGAGACGCTCGGAACGTTTGACGGTCACGTCGATGGTGTTCGCGGTACGTCCACTCTAGGCTCCCTCGTTATTTACAATGAGGAGACGTCCGGTGGTGCATACATCCCGATGCCTATGCGTGGCCTTCGGATTGACAACGTGTTCCCTAAAGAGGGTCAGTCGGTTCGCCAGCTGGTTCGCGTTGCTGCCTATGCGTCGACCTCAGATGCTCGTGATGTAATCATCTCGAACGTTCAGGGTAACGTTACGGCGTCTCATGGTGTTCAGGTGCAGAACGTCAAGAACGTGTTCTTAGACAATGTGGATGCACACGTGGTGTCCTCAAGCTCTCACGGTGTGTACATTAGTAACTGTGATGTTGTCCGTGGTAACGTGAGCGGTACAACCTCCGCGTCTACACACGATGGCGTCCAAGTGTTCAACTCTAAGAACGTCGAGCTGGACATCACCTCTCGCGCAAGTGCCGGGAACGCTGCCCAGATTAACGGTTGTACCAACGTCCGTGTTGTACCACTCTTCTCTTCTGCTGGAGCGGCAGGCCTGCGCATCACCGGGTCAACCAATGTGGACGTCCCGTCAGGGACATTTAGTGGTACGTTCCCCGGACTCTGTATCAACCAAACTGGTAACACAAACTTGTTCATCGCTGCGACTATCCTGTACGACACAGCGTCTGGTCGAATCAACAGCCCAGTGGCCTCCATGTTTATGGACATCCCTGCGGTTATCATTTCGGCCAAGGAGGCAGCTGACGGTACCCTTACCGTATACCGAGCTATCGGTGGGACAATCACGCGGCTGGCCACAGGTCGCTATCAGATTACCTTCACCAACCCGATGCAGACGGCGCAGTTCACCTTTACGATGACAGCAGCGCATCCGGGGAGTGTTCGTCAGGCGTACACAGCTTCCGCTATTGGGACTGACGGTCTTACTCTGGGTGTTAAGGACTCTGCTGGTACCGACATTCACTCTGAGTATATTCGCTTCATTGCTTACAACTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
711010d6d9ad36a74806abc385219b02b3567314021588cbf4fd8bdaeebeaf2d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7872
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50