Protein

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Genbank accession
CAH7774707.1 [GenBank]
Protein name
putative gpH domain protein [Escherichia phagephAPEC8]
RBP type
TSP
Evidence RBPdetect
Probability 0,55
TF
Evidence RBPdetect2
Probability 0,59
Protein sequence
MAKPQYYPDWATQTVTLPGTGNTNKIRPKETIRNVGMDFGQIMTCEEMNWILNNIGSWIRYMQDEFFPTLPTTYLPIVGTKITMAGDATGEVTWNGNAAVTLSIQVVDNSHNHLSSNITDATSNQVVGNVLVKRDNGGAIYAGDIYTCGTSATDPATLFFRNYNGQTVGNMSSEPGAGGQLYIYRINPSTGGTSCGIRLYDAGYVLIDNPRSNSGQDTGNGNALVRLDYLNSRLNSLQSTLQNNINNVNSNLQGQINNINNRVSSVVSSIRLGTRIRAGVSESPFYAGHVITGWGFGDKKELRGAWYWSAPLQYYINGSWITVTNV
Physico‐chemical
properties
protein length:326 AA
molecular weight: 35595,24930 Da
isoelectric point:6,82280
aromaticity:0,09509
hydropathy:-0,32883

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAH7774707.1
1 326
Domain Start End Length (AA) Confidence
N-terminal 1 238 238 0,5733
Central domain 239 315 78 0,2766
C-terminal 316 326 10 0,9985
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-238
Central
239-315
C-terminal
316-326

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_Eco_PATM
[NCBI] 		2886363 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAH7774707.1 [NCBI]
Genbank nucleotide accession
OX090893 [NCBI]
CDS location
range 52624 -> 53604
strand +
CDS
ATGGCAAAGCCACAATACTACCCTGACTGGGCGACACAAACAGTAACCCTCCCAGGAACGGGAAACACAAACAAGATTAGACCAAAAGAAACCATCCGTAATGTTGGTATGGACTTTGGTCAGATTATGACTTGTGAAGAAATGAACTGGATCTTAAACAATATTGGGTCTTGGATTCGCTATATGCAAGATGAATTCTTCCCAACATTGCCTACTACATATCTTCCTATAGTCGGTACTAAAATTACAATGGCAGGTGATGCTACAGGTGAAGTTACATGGAATGGTAATGCTGCTGTAACATTATCTATTCAAGTCGTAGATAACAGTCATAATCACTTATCATCTAACATTACAGACGCAACATCAAACCAAGTTGTAGGTAATGTCCTTGTTAAGCGTGATAATGGTGGTGCTATCTATGCAGGTGATATTTACACTTGTGGTACAAGTGCTACAGATCCTGCAACATTATTTTTTAGAAACTATAACGGACAAACAGTAGGCAATATGTCTTCTGAACCAGGTGCAGGTGGTCAACTCTATATTTATAGAATAAATCCATCTACTGGAGGAACATCTTGTGGAATCCGTTTGTATGATGCAGGTTATGTTTTAATAGACAACCCTCGTTCTAATTCTGGTCAAGATACTGGTAATGGTAATGCTCTTGTAAGATTAGATTATCTTAACTCAAGATTAAACTCATTGCAAAGCACACTGCAAAATAATATTAACAACGTTAATAGCAACTTGCAAGGCCAAATTAATAACATTAACAACAGAGTTTCTTCGGTTGTGTCTTCTATCCGTCTAGGTACACGTATTAGAGCGGGTGTATCTGAATCTCCTTTCTATGCTGGTCATGTGATCACAGGCTGGGGTTTTGGTGATAAGAAAGAACTTCGTGGTGCTTGGTATTGGTCTGCTCCGCTACAATATTACATTAATGGTAGTTGGATAACAGTAACCAACGTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
c49133e0724f54594d59e0aed545c9da47a1c8680d13818008adb1c2560da884
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7010
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50