Protein

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Genbank accession
AGH26589.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MSTVRVEQLVANSDHNFEIRFAPSANLLIRGGYAADPDSGLILPAGTTADRPTTPDAGQIRYNTTEQTVEGYNGTVWVNLMKSGSSSASGTTTDVPRKGLFMWLDANNERSLKPQASDQDANYWYDISGNNFHTAIPTDRYAQDNINGQVVKYMDFSENGSGCAKLVSQGNYTDTPYFPHLSVIFFLKWRTSDSQWRTPLRSRDSDHHIIVQDGTKNLGMYDNGGNGFNDTGYDINQFPDWDSKLNMYTWRLSSYESGQYSPNYQCFFKDEANARATINSSNSRFARGFHHIGAWGEGNRNPHSSSQNCGGFGVFMVYNRHITQAERQQIYDYYKDTYGI
Physico‐chemical
properties
protein length:340 AA
molecular weight: 38306,38400 Da
isoelectric point:5,69455
aromaticity:0,12941
hydropathy:-0,74853

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGH26589.1
1 340
Domain Start End Length (AA) Confidence
N-terminal 1 147 147 0,1820
Central domain 148 329 183 0,0877
C-terminal 330 340 10 0,9927
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-147
Central
148-329
C-terminal
330-340

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage P-RSM3
[NCBI] 		536446 Uroviricota > Caudoviricetes > Pantevenvirales > Ronodorvirus > Ronodorvirus ssm4
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH26589.1 [NCBI]
Genbank nucleotide accession
HQ634176 [NCBI]
CDS location
range 54762 -> 55784
strand -
CDS
ATGAGTACAGTAAGAGTAGAACAATTAGTAGCAAACTCGGATCATAATTTTGAGATTCGTTTTGCTCCTAGTGCCAATTTATTAATACGAGGTGGTTATGCTGCTGACCCTGATTCTGGTTTAATATTACCTGCAGGAACAACAGCAGATAGACCTACAACACCAGACGCAGGACAGATACGTTATAATACAACTGAACAAACTGTAGAGGGATATAATGGTACTGTATGGGTAAACTTGATGAAGAGTGGATCTTCAAGTGCAAGTGGTACAACTACTGATGTACCTCGTAAGGGATTATTCATGTGGTTAGATGCTAATAATGAAAGATCATTAAAACCTCAGGCAAGTGACCAAGATGCAAACTACTGGTATGATATAAGTGGAAATAATTTCCATACTGCCATACCTACAGATAGATATGCTCAGGACAATATTAATGGTCAAGTTGTCAAATATATGGATTTTTCTGAAAATGGTTCTGGTTGTGCTAAATTAGTTTCACAGGGTAATTATACAGATACACCTTATTTTCCTCATTTATCTGTCATCTTTTTCTTAAAATGGAGAACCTCTGATAGTCAATGGAGAACACCATTGAGATCAAGAGATAGTGACCATCATATCATTGTACAGGATGGTACAAAGAATCTTGGTATGTATGATAATGGTGGTAATGGTTTTAATGATACTGGATATGATATTAACCAGTTTCCTGACTGGGATAGTAAATTAAATATGTACACATGGAGATTATCTTCATATGAATCTGGACAATACTCTCCTAACTATCAATGTTTTTTCAAGGATGAAGCAAATGCTCGTGCTACTATCAATAGCAGCAATAGTAGATTTGCAAGAGGATTCCACCACATAGGTGCATGGGGTGAAGGTAATAGAAATCCTCATAGTTCATCACAGAATTGTGGTGGTTTTGGTGTCTTTATGGTCTATAATAGACATATTACACAGGCAGAAAGGCAACAAATTTATGATTACTACAAAGATACGTACGGTATCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
365fcf58dfd18d02328c5f902a12817f8c149a83b6ee20115037366ac8b99913
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7217
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage P-RSM3 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank