Protein

View in Explore
Genbank accession
USL89547.1 [GenBank]
Protein name
pre-neck appendage protein
RBP type
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MSNIKIPPMVNPFPVTQQDYRHYLPTAYDSSMNIYETLVAMREYLNQLIASQNELIQQWIDLQKWINETLETYTREQIERMLDDGTFDELINDKLFKDLETRMNNRVNQAIIEMNDKVNSIVSASPVDVVETVEELNSKYPNGRTGIVVVKADGFYYYYQNNQWNKGALYVDPVTYPMLKKDGTAINLNLSTSWRENPDITTLKSGYYTVYVQNKPNNPEYPVAINFPPNIDGNICLVTVVEHGNEGRTDYKLTINAVNTNYTATKTLTGQMTEWSYTVEHSESKPKQQYQLTFADGTVANWKYGTKNEEQQSRDDLIVNIGSLDSKFYYGQINKPDEGKIEDRGLPSDIFYGQFYSAIIWRTASNRKTIILNANFGGISWIGYYGTNNSLQGWRRIDDKVDPIRGDKSKFAFKVNDNKPTFRHLVMTDVHAQIGVGETQIDRVNTSHYDNFNDLGKLVENISAELHLGDWFDGNYSKDKSAESIVDFSKKFYSKQNRYGVYGNHDYNCQWDGQAGKNGVHARDLNYMLKREEIDKYFTPAIVDKGYYHIDDSKNKIRMIFLSSFDLSYKLDSEGKTITDPLNQRMIGGAQIDWLVKTLKEKPSNYNVVIYTHETFDNVFSDDVYFNGDTARKIAEGFQAKKKDTYSASDITEVHPDYDYFKCDGEFDFTGTDGKILAVVSGHRHTDNTKFQGGIRYISLLCSKAESGSTPQKPNRNYFNVTQDALSVLDFDVTNQKINLYRFGAGLDYTFNMFS
Physico‐chemical
properties
protein length:755 AA
molecular weight: 86721,58850 Da
isoelectric point:5,37398
aromaticity:0,12450
hydropathy:-0,65192

Domains

Domains [InterPro]
DC_1932
STR
20–523
DC_1932
IPR029052
STR
420–732
IPR029052
IPR029052
STR
422–703
IPR029052
IPR004843
ENZ
424–633
IPR004843
USL89547.1
1 755
Architecture
STR
STR 20-732 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
USL89547.1
1 755
Domain Start End Length (AA) Confidence
N-terminal 1 418 418 0,9056
Central domain 419 617 200 0,6397
C-terminal 618 755 137 0,5179
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-418
Central
419-617
C-terminal
618-755

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage vB_BceP_LY3
[NCBI] 		2950458 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus cereus
[NCBI] 		1396 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
USL89547.1 [NCBI]
Genbank nucleotide accession
ON366412 [NCBI]
CDS location
range 20130 -> 22397
strand +
CDS
ATGTCAAATATTAAAATACCGCCTATGGTGAACCCGTTTCCTGTAACTCAACAAGATTACAGACATTATCTTCCTACCGCTTATGATTCTAGTATGAACATATATGAAACACTTGTTGCAATGAGGGAATATTTAAATCAGCTAATTGCTTCTCAAAATGAATTAATTCAACAATGGATTGATTTGCAAAAGTGGATCAATGAAACATTAGAAACATATACAAGGGAACAAATTGAAAGAATGTTAGACGATGGTACTTTTGATGAATTGATTAATGATAAATTATTCAAAGATTTAGAAACAAGAATGAACAACAGGGTGAATCAGGCTATTATTGAAATGAATGATAAAGTTAATTCGATTGTGTCCGCGTCTCCTGTTGATGTTGTGGAAACTGTTGAAGAATTAAATTCAAAATATCCAAATGGTAGAACAGGAATTGTTGTTGTGAAAGCGGATGGTTTTTACTACTACTACCAAAATAATCAATGGAATAAAGGAGCATTATATGTTGATCCTGTAACATATCCAATGCTTAAAAAAGATGGTACAGCAATAAACTTAAATCTTTCTACTTCGTGGAGAGAAAACCCTGATATTACAACTTTAAAATCAGGTTATTACACGGTTTACGTTCAAAATAAACCAAATAATCCTGAATATCCTGTTGCAATTAACTTCCCACCTAATATTGATGGTAATATTTGTTTGGTTACTGTTGTTGAACATGGTAATGAAGGTAGAACGGATTATAAATTAACAATTAATGCTGTTAATACAAACTATACAGCTACTAAAACATTAACGGGACAAATGACTGAATGGTCTTATACTGTTGAGCATAGTGAATCAAAACCTAAACAACAATACCAATTAACATTTGCTGATGGCACAGTTGCTAACTGGAAATATGGTACAAAGAATGAAGAACAACAATCAAGAGATGATTTAATTGTAAATATTGGTTCTTTAGATTCTAAGTTCTATTATGGGCAGATCAATAAACCTGATGAAGGTAAAATTGAGGATCGTGGATTACCTAGTGATATTTTTTATGGTCAATTCTATAGCGCTATTATATGGAGAACGGCATCAAATCGTAAAACAATTATCTTGAATGCTAACTTTGGTGGCATTTCATGGATTGGTTATTATGGAACGAATAATTCTCTACAAGGTTGGCGTAGAATTGATGATAAAGTTGACCCAATTCGTGGTGACAAATCTAAGTTTGCTTTTAAAGTGAATGATAACAAACCTACATTCAGACATTTAGTTATGACTGACGTGCATGCTCAAATTGGAGTAGGTGAAACTCAGATTGATAGAGTAAATACAAGTCATTATGATAACTTTAATGATTTAGGTAAATTAGTTGAAAATATTTCCGCTGAATTACATCTAGGTGATTGGTTTGACGGTAACTATTCAAAAGATAAGTCAGCAGAATCTATTGTTGATTTTAGTAAAAAATTCTATTCTAAACAGAATCGTTATGGTGTGTATGGAAACCATGATTACAATTGTCAATGGGATGGTCAAGCAGGTAAAAATGGTGTTCATGCCAGAGATTTAAATTATATGTTAAAAAGAGAAGAAATAGATAAATACTTTACACCTGCTATTGTGGATAAAGGGTATTATCATATTGATGATTCCAAAAACAAAATTAGAATGATATTCTTATCATCATTTGATTTAAGCTATAAATTAGATAGCGAAGGAAAAACAATTACTGATCCATTAAATCAACGCATGATAGGTGGAGCGCAAATTGATTGGTTGGTAAAAACATTAAAAGAAAAACCATCTAATTATAATGTTGTTATTTATACACATGAAACGTTTGATAATGTATTCTCAGATGATGTTTATTTTAATGGTGATACAGCTAGAAAGATAGCCGAAGGTTTCCAAGCTAAAAAGAAAGATACTTATTCAGCTAGTGATATTACAGAAGTTCACCCTGATTATGATTACTTTAAATGCGACGGTGAATTTGATTTCACTGGAACTGACGGGAAAATTTTAGCGGTAGTAAGCGGACATAGACATACAGATAATACGAAATTCCAAGGTGGTATTCGTTATATATCATTGCTATGTTCAAAAGCTGAATCAGGATCAACACCGCAAAAACCAAATCGAAATTATTTCAATGTTACCCAAGACGCTTTAAGTGTTCTTGACTTCGATGTAACGAATCAAAAAATTAATTTATATCGCTTTGGAGCGGGTCTTGATTATACTTTCAATATGTTTAGTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
23d7a5d87363573484f7b849c1d91c7367d60946a55c7bc9a332c82c1e0c5809
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6651
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50