Protein

View in Explore
Genbank accession
QIG61044.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,80
Protein sequence
MSRYDHSTVEYTDKIKDLTDSVNRVGNYLSGDNSPYDDVQKLKAITQNIKLTKDTGLAKSITAGTTALRSVVEVGVYYINSTEALALTDKPPELTGAFILVNYPTTASTSVKQEVHMFATGTTGSYVGYRWISASSVSSWWTYENTLGSQAKADKALADGKTYTDSSVNSALQAIQNSAQMYKLTEDDGKPIDASAMATPPTSVASLTKTGIYYFTAAFGNTMPDTPCTGQPFWLVVLQHVTDNSISQSVTANTVAVERVVADRIITTLGVPSKWEYRAKASNFFFSASNSSRITLVSTQQNIITPNKFINNPGSLPLSAINPAITIPEDGMYHVMASLNINGILEKVYLVSELTLLINDVLHPATFGMVKTADNANGQYSLAGNGIYQLKKGDKLKLRSYCNNTGNNPYLDVDKLYISVGKIADISLFK
Physico‐chemical
properties
protein length:430 AA
molecular weight: 46650,06900 Da
isoelectric point:6,53190
aromaticity:0,08837
hydropathy:-0,16744

Domains

Domains [InterPro]
DC_1285
ATT
1–158
DC_1285 IPR008983
DC_1773
STR
152–401
DC_1773
QIG61044.1
1 430
Architecture
ATT
STR
RBD
ATT 1-158 | STR 159-401 | RBD 402-415 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage vB_Liva_VAfA18
[NCBI] 		2712945 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG61044.1 [NCBI]
Genbank nucleotide accession
MN939540 [NCBI]
CDS location
range 79670 -> 80962
strand +
CDS
TTGTCTAGATACGACCATAGTACTGTAGAGTACACAGACAAAATTAAGGACTTAACAGATTCGGTAAACCGAGTAGGAAACTACTTATCAGGAGACAATAGCCCTTATGACGATGTCCAGAAATTGAAAGCAATTACACAAAATATTAAGCTAACTAAAGATACAGGTTTAGCTAAAAGCATTACAGCAGGAACAACTGCGTTGAGGTCAGTAGTCGAAGTAGGGGTTTACTATATTAATAGCACAGAAGCTCTAGCCCTAACTGATAAACCCCCAGAGCTAACAGGAGCCTTTATACTAGTAAACTACCCGACAACAGCCTCTACTTCTGTTAAGCAAGAAGTACACATGTTTGCTACAGGAACAACAGGTAGCTACGTAGGGTACCGATGGATTTCTGCTTCTAGTGTCAGTTCATGGTGGACTTATGAAAACACACTAGGTTCACAAGCTAAAGCAGATAAAGCATTAGCGGACGGGAAAACATATACTGATAGCTCAGTAAACTCCGCTTTGCAAGCAATTCAAAACTCAGCACAAATGTACAAGTTAACCGAAGACGATGGCAAGCCAATTGATGCTTCTGCTATGGCTACTCCACCAACTAGTGTAGCTTCTCTAACGAAGACAGGAATATATTACTTTACTGCCGCTTTTGGAAATACAATGCCAGATACCCCTTGCACAGGGCAACCATTCTGGTTGGTTGTTTTACAGCATGTAACAGATAACAGTATATCACAATCTGTGACAGCCAACACTGTAGCAGTAGAGAGGGTAGTCGCAGATAGGATTATTACTACTCTAGGGGTACCGAGTAAGTGGGAATACAGAGCTAAAGCCTCTAATTTCTTCTTTAGTGCTTCCAATTCGTCACGTATAACACTAGTATCGACCCAACAGAATATTATAACACCTAATAAATTTATTAACAACCCCGGTAGTTTACCATTATCTGCGATAAACCCTGCAATAACTATTCCAGAAGACGGGATGTATCATGTCATGGCATCTTTAAACATTAACGGTATTTTAGAAAAAGTGTACCTAGTAAGTGAGCTAACTCTACTAATAAATGACGTATTACACCCAGCTACATTTGGAATGGTAAAAACAGCAGATAATGCTAACGGGCAGTACTCTTTAGCAGGGAATGGCATATATCAACTAAAAAAAGGGGACAAGTTAAAACTAAGAAGTTATTGTAACAATACAGGAAATAACCCTTACTTGGATGTAGATAAACTTTATATATCTGTTGGTAAGATTGCAGACATTTCATTATTTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
43b0440482ef1cbed7fe611cc65df0ff8b3da55c06ae437636b75523b49a0421
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8155
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative genomic and phylogenetic analyses of the P100virus genus of Listeria bacteriophages and report of two new members Blanco Fernandez,M.D., Barrios,M.E., Mbayed,V.A. and Klumpp,J. 2021-01 — GenBank