Protein

View in Explore
Genbank accession
YP_009797292.1 [GenBank]
Protein name
head protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSKIVLYPANGYDFDAADVAAYLAGLTSGVFSSAEDFPVTAAGGLKVTVGMGRGWVHPSRFTGYSITKREADTLTMPLADPSLPRIDRIVMRYDAGARAASLHVLQGTASSTPTAPAISRTELIYDLCLAEITRPAGSTAVTTGQITDTRLDEKLCGIVRDGVTGIPTDELLAAARERIATLEENASNSAAAAKDSAEAAKSSETKSAASEKNAKDSETNAQRALQDTETKHTAALKDIAQARTAALNDVAASTKTATAAANIATQQATAAAGSASTAATKAGEASTSAGAASTSRQAAEKAQKAAEDAAALAGTRAGTDKTLRVEDAPADAAAVRKLIEESLAAQREEDYKRVRYWASNDPTSPASFIGGTWERVEGEFIMGASSAYPVGTTGGSATHTQTTAEMPSHNHSGSTGSAGGHSHSASTGSAGSHSHSGTTDWAGSHSHNVNAEYKSGGDDGESYRIRNYGASWANYKFTTSSDGSHTHSFSTNSAGGHSHSVSIGDAGAHTHTVSIGSTGSGQAMSVLNPYYALYIWVRVDDAA
Physico‐chemical
properties
protein length:543 AA
molecular weight: 55806,14790 Da
isoelectric point:5,76571
aromaticity:0,05525
hydropathy:-0,37680

Domains

Domains [InterPro]
DC_1002
STR
1–343
DC_1002 IPR053827
Coil
Unmapped
172–192
Coil SSF88874
SSF88874
STR
378–445
SSF88874 DC_0348
YP_009797292.1
1 543
Architecture
STR
ATT
STR 1-343 | ATT 357-543
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Faecalibacterium phage FP_Lugh
[NCBI] 		2070184 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Faecalibacterium prausnitzii
[NCBI] 		853 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Eubacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009797292.1 [NCBI]
Genbank nucleotide accession
NC_047912 [NCBI]
CDS location
range 30182 -> 31813
strand +
CDS
TTGAGCAAAATCGTTTTATATCCCGCCAACGGCTACGACTTCGATGCCGCAGACGTAGCGGCCTACCTTGCGGGCCTCACCAGCGGCGTGTTCAGCTCCGCTGAGGATTTCCCGGTGACAGCCGCAGGCGGGCTGAAGGTCACCGTGGGCATGGGCCGTGGCTGGGTGCACCCCAGCCGCTTCACTGGCTACTCCATCACCAAGCGGGAGGCCGACACCCTGACCATGCCGCTGGCCGACCCGTCTCTCCCCCGCATCGACCGCATCGTCATGCGCTATGATGCCGGTGCCAGAGCCGCCAGCCTGCATGTGTTGCAGGGCACGGCATCCAGCACTCCCACGGCCCCGGCCATCTCTCGCACCGAGCTGATCTACGACCTCTGTCTTGCCGAGATCACCCGCCCGGCAGGCTCCACCGCCGTCACCACCGGCCAGATCACCGACACCCGGCTGGACGAGAAGCTCTGCGGCATCGTGCGGGACGGTGTGACCGGCATCCCCACCGACGAGCTGCTGGCCGCTGCCCGGGAGCGCATCGCCACGCTGGAGGAGAACGCCAGCAACAGTGCTGCCGCCGCCAAGGACAGCGCGGAGGCAGCCAAGAGCAGCGAGACCAAGTCCGCCGCCAGCGAGAAGAACGCCAAGGACAGCGAGACCAACGCCCAGCGGGCCCTGCAGGACACGGAGACGAAACACACCGCCGCCTTGAAGGACATCGCACAGGCCCGCACCGCGGCCCTGAACGACGTGGCAGCTTCCACCAAAACGGCCACCGCTGCGGCAAACATTGCCACCCAGCAGGCCACCGCCGCTGCGGGGAGCGCTTCCACCGCCGCCACTAAGGCCGGGGAGGCATCTACCAGCGCGGGAGCGGCATCCACCAGCCGTCAGGCAGCGGAAAAGGCCCAGAAAGCCGCAGAGGATGCCGCAGCGCTGGCTGGAACGCGGGCAGGTACCGATAAGACCCTGCGCGTAGAGGATGCACCGGCGGATGCGGCGGCGGTAAGAAAGCTGATCGAAGAATCCCTTGCCGCCCAGCGGGAAGAGGACTACAAGAGAGTCAGGTACTGGGCCAGCAACGACCCCACCAGCCCGGCAAGCTTTATCGGCGGCACATGGGAGCGCGTCGAAGGTGAGTTTATCATGGGCGCTTCCAGTGCCTACCCTGTGGGTACCACCGGCGGCAGCGCCACCCACACCCAGACTACTGCCGAAATGCCGAGCCACAACCATAGCGGGTCTACTGGCAGTGCAGGCGGCCACAGCCACAGTGCATCCACCGGCTCCGCAGGAAGCCACAGCCATAGCGGTACGACCGATTGGGCGGGTTCGCATAGCCATAATGTGAATGCTGAGTATAAGAGTGGCGGCGATGATGGCGAATCGTACCGTATTAGGAACTATGGAGCTTCCTGGGCTAATTATAAATTTACAACCAGTTCTGATGGTTCCCACACCCACAGCTTCAGCACGAACAGCGCAGGCGGGCACAGCCACTCTGTGAGCATCGGAGACGCTGGCGCTCACACTCATACCGTGAGCATCGGCAGCACCGGCAGCGGGCAGGCAATGAGCGTCCTGAACCCTTACTATGCCCTGTACATCTGGGTGCGGGTGGATGATGCCGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ee0c5cea0bd5f5cbf042f63d53e80113a7d3bbc50acd90cdde18c916b8293434
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7419
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phages infecting Faecalibacterium prausnitzii belong to novel viral genera that help decipher intestinal viromes Petit,M.-A., De Paepe,M., Benevides,L. and Langella,P. 2018-04-03 — GenBank