Protein

View in Explore
Genbank accession
WCD56308.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
Protein sequence
MTSYTETFGGNTLYPSDVSYLALSLTTDTQTYWPLDANTGVPVLARIVDITPSGAYAVILPDATLTGAGQTVLFNNLGPSTVTIKNFSGGTVATITAGTAWTIYLTSNATAAGSWRVFQQGAYTAQAQASALAGYGLTATGATLSQSTPVTTLNSTYTAGAADRAKMLVWTGGLGDVNLPSVSTVMNGYYVSFSNQGAGDWTVNADGSDLIDGAATLVLPPQGSVTLATDTTGWYTLGLGATVQSDFDFTSIDLTGQSSPYTLSGAELNRVAYEFVGTLVANMVVVIPSTIQQYWITNSTTGGSYTLSFRTASQTPALTVVRNTRGIFYCTGSAIIDADTSTIATPIAIADGGTGATTATAAVTNLGGTTVGAALFTASSASVARTTLGSTAVGDALFTAASASAARTTLGATAVGDAVFIAASTSAAQTAIGATVTGAALFTAASASAARTTLGSTTVGDAVFIAASTGAAQTALALVPGTNVQAYSANLQAISGVTSAADRLFYFTGSGTGALATFTSVARTLVGQATQALMRTTGLGSTTVGDALFTTASASAARTTLGVVIGTDVQAYSANLAAVAGVTSAANKLFYFTGSGTGAVTDLTSQSRSFLATTTGSAALATLFTPGTLNSAILSDGAGGWAVSSLPVSGEWFATSTTTIAAPTTSVVVTIPPGYAMMSVELIGITSSLAPSLDSVSIEVSNDGGSNYASVLQTPGVALPLYGDVFFPDYLGEAEAVSTIYQASSSSSALSAAGTAALNPVRHSGGVNRVRVRCGSGNLTAGMIKVKLK
Physico‐chemical
properties
protein length:789 AA
molecular weight: 78779,89030 Da
isoelectric point:4,48326
aromaticity:0,07731
hydropathy:0,37212

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Caulobacter phage RLK
[NCBI] 		3020399 No lineage information
Host Caulobacter crescentus
[NCBI] 		155892 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Caulobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCD56308.1 [NCBI]
Genbank nucleotide accession
OQ135106.1 [NCBI]
CDS location
range 37936 -> 40305
strand -
CDS
GTGACCTCGTACACCGAGACGTTCGGCGGTAACACGCTCTACCCGTCCGATGTGTCGTATCTGGCGCTTAGCCTGACCACCGACACGCAGACCTACTGGCCGCTGGACGCCAATACGGGCGTTCCGGTGCTGGCCCGCATCGTGGACATCACGCCGAGCGGCGCTTACGCCGTGATCCTACCGGATGCGACGCTGACCGGCGCTGGCCAAACCGTGCTGTTCAACAACCTCGGCCCGTCGACAGTCACGATCAAGAACTTCAGCGGCGGCACGGTCGCGACGATCACGGCAGGCACCGCCTGGACGATCTACCTAACGAGCAATGCGACGGCTGCGGGCTCGTGGCGCGTGTTCCAGCAAGGCGCGTACACCGCGCAAGCTCAAGCCTCGGCGCTGGCGGGCTACGGCCTCACGGCGACGGGCGCGACGCTCTCGCAGTCCACACCGGTCACGACGCTCAACTCGACCTACACGGCGGGCGCGGCTGACCGCGCCAAGATGCTTGTCTGGACCGGTGGTCTTGGCGATGTGAACCTGCCGTCTGTGTCGACGGTCATGAACGGCTACTACGTCTCGTTCAGCAACCAGGGCGCGGGGGATTGGACCGTAAACGCCGACGGCTCGGACTTGATCGACGGCGCGGCGACGCTGGTGCTGCCGCCGCAAGGCAGCGTGACCTTGGCCACCGACACGACCGGCTGGTACACGCTGGGCCTTGGCGCGACGGTGCAGTCGGATTTCGACTTCACGTCCATCGACCTGACCGGCCAGTCGTCGCCCTACACCCTGAGCGGGGCGGAGCTGAACCGCGTAGCCTACGAGTTCGTCGGCACGCTGGTCGCCAACATGGTCGTCGTCATCCCGAGCACCATCCAGCAATACTGGATCACGAACTCGACGACGGGCGGCTCTTACACCCTGTCGTTCAGGACCGCGTCACAGACGCCCGCGCTGACTGTCGTGCGCAACACTCGCGGCATCTTCTACTGCACCGGCAGCGCGATCATCGACGCCGACACCAGCACCATCGCAACGCCCATCGCTATCGCCGACGGCGGTACCGGCGCGACGACGGCCACGGCGGCGGTGACGAACCTTGGCGGCACGACGGTCGGCGCTGCGCTGTTCACCGCGTCCTCGGCCTCGGTGGCGCGCACGACGTTGGGGTCGACGGCCGTCGGTGACGCGCTGTTCACCGCAGCGTCAGCAAGTGCGGCGCGCACGACGCTCGGCGCAACCGCCGTCGGCGACGCAGTGTTCATCGCTGCGTCTACAAGTGCTGCGCAGACGGCTATCGGCGCTACGGTTACGGGCGCTGCGCTGTTCACCGCCGCTTCCGCGTCTGCGGCTAGGACGACACTCGGCTCTACGACAGTCGGCGACGCGGTGTTCATCGCGGCGTCCACGGGTGCTGCACAGACCGCCCTCGCGCTGGTCCCCGGTACCAACGTCCAGGCGTACAGCGCCAACCTTCAAGCCATCTCAGGCGTGACGTCCGCCGCCGACCGGCTGTTCTACTTCACGGGCAGTGGCACGGGAGCGCTTGCGACGTTCACCAGCGTCGCCCGCACGCTCGTCGGCCAAGCGACGCAAGCGCTTATGCGCACGACGGGGCTGGGCTCTACGACGGTCGGTGACGCGCTGTTCACCACTGCGTCGGCCAGCGCGGCGCGCACGACGCTGGGCGTCGTTATCGGCACGGACGTCCAAGCCTACAGCGCCAACCTCGCTGCTGTTGCGGGCGTCACTTCCGCCGCGAACAAGCTGTTCTACTTCACGGGCAGCGGCACGGGGGCTGTGACGGACCTGACGTCGCAGAGCCGGTCGTTCCTCGCGACCACAACGGGCTCCGCCGCGCTGGCGACGCTGTTTACACCGGGCACGCTCAACAGCGCCATTCTGTCCGACGGGGCGGGTGGCTGGGCCGTCAGCTCGCTGCCGGTATCCGGTGAGTGGTTCGCGACCAGCACCACGACCATCGCCGCGCCTACCACCTCGGTGGTCGTCACCATACCGCCGGGCTACGCGATGATGTCCGTGGAGCTTATCGGCATCACCTCGTCGCTAGCCCCCTCCCTCGACTCTGTTAGCATAGAGGTGTCCAACGACGGCGGTAGCAACTACGCGTCAGTGCTACAGACGCCGGGGGTAGCCCTGCCGCTTTATGGCGACGTGTTCTTCCCAGACTACCTGGGCGAGGCCGAGGCCGTGTCCACTATCTATCAGGCGTCCTCGTCCTCGTCTGCTTTGTCGGCGGCGGGCACGGCGGCGCTTAATCCCGTTCGCCACTCCGGCGGCGTGAACCGCGTGCGCGTGCGCTGCGGCTCGGGCAACCTGACGGCCGGAATGATCAAGGTGAAGCTCAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1d3cd12c3fc18fcd66b52b29bea764e523831c0d529f2802cf6abc3aaa75fbd7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7588
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
New Genera and Species of Caulobacter and Brevundimonas Bacteriophages Provide Insights into Phage Genome Evolution Ely,B., Hils,M., Clarke,A., Albert,M., Holness,N., Lenski,J. and Mohammadi,T. 2024 — GenBank