Protein

View in Explore
Genbank accession
BDD79589.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,60
Protein sequence
MSTPLVIRYPLDPTGTSTNNLVTGEIQNLTANRNVRAIAPMYGAFYTDSLIVTDTATNQPLTPGTQYYAAEMYELPTARYGKQICAVILITDPTVSNQVSLQYQALGGPYSTSAQAIIQQISNLQLDTRPVAWGDILDRPSEFPPAFHLHDIGDVYGFEYLVHAIDRVRDAIEVGDTAQYDQIYAYIDHVQQTLQAEIDSGNAGLAAHLADFTNPHRVTAAQLSVYTKAQSDAITTPINTTLTNHVANKSNPHQVTVAQLNTYDGPTIDSKIATAVAAVRIPFTPVQQGGGANQGTNKIYLGWDGARLRLQVDSSDLGGMVTYNEMLSNVNNLQNQINARVVIGNPIAYTNIGQSVSFGDVTATGTLYSYHDVWAFWSDERLKTNIQQIENPLEKIRQIMGVIYTHNELAAQLTGCDTSVEHMGLLAQQIFAIAPQLVGPAPFDVDPITGGSISGEHYITIKYDKLVALLVEGIKALDKQTQDHEQRLLQLEG
Physico‐chemical
properties
protein length:493 AA
molecular weight: 53833,73280 Da
isoelectric point:4,86226
aromaticity:0,07708
hydropathy:-0,16633

Domains

Domains [InterPro]
DC_1220
STR
8–493
DC_1220
IPR030392
CHP
378–438
IPR030392
IPR030392
CHP
378–488
IPR030392
BDD79589.1
1 493
Architecture
STR
STR 8-493
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage FLC9
[NCBI] 		2906467 No lineage information
Host Burkholderia glumae
[NCBI] 		337 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDD79589.1 [NCBI]
Genbank nucleotide accession
LC667451 [NCBI]
CDS location
range 75233 -> 76714
strand +
CDS
ATGTCGACGCCACTTGTCATTCGCTACCCGCTCGATCCGACGGGTACGAGCACCAACAACTTGGTGACGGGGGAAATCCAGAACCTGACGGCTAACCGAAATGTCCGCGCGATTGCGCCGATGTACGGTGCGTTCTATACGGACAGCCTGATCGTAACGGACACCGCCACCAATCAGCCACTCACGCCGGGCACCCAGTACTACGCTGCCGAGATGTACGAGTTGCCCACGGCCCGTTACGGTAAGCAAATCTGTGCGGTCATTCTGATTACGGACCCGACCGTCAGCAATCAGGTCTCGCTGCAGTATCAGGCCCTGGGTGGCCCGTACAGCACGAGCGCACAAGCGATCATCCAGCAGATCAGCAACCTGCAACTGGACACGCGTCCGGTAGCGTGGGGCGACATCCTGGATCGGCCGAGCGAATTCCCACCTGCTTTCCACTTGCACGACATCGGCGACGTGTATGGCTTCGAGTATCTCGTTCATGCGATCGATCGCGTGCGGGACGCCATCGAAGTGGGCGATACGGCACAGTACGACCAGATCTACGCCTACATCGACCACGTCCAGCAAACGCTGCAAGCCGAGATCGATTCAGGCAACGCAGGTCTCGCTGCTCACTTGGCGGATTTCACGAATCCGCACCGTGTCACCGCTGCTCAGCTGAGCGTGTACACGAAGGCGCAGTCCGATGCGATCACCACGCCGATCAACACCACGTTGACCAACCACGTGGCTAACAAGAGCAATCCTCACCAAGTGACGGTGGCTCAGTTGAACACGTATGATGGTCCGACGATCGATTCGAAGATCGCGACTGCTGTCGCCGCGGTCCGAATTCCGTTTACGCCGGTTCAGCAGGGCGGCGGTGCCAACCAAGGCACCAACAAAATCTATCTGGGTTGGGACGGCGCCCGCTTGCGTCTGCAGGTGGATTCGAGCGACCTCGGCGGGATGGTCACGTACAACGAAATGCTCAGTAACGTGAACAACCTGCAGAACCAGATCAATGCGCGTGTGGTGATCGGTAACCCGATTGCTTACACCAACATTGGTCAGTCGGTGTCCTTCGGCGACGTCACGGCGACGGGCACGCTTTATTCGTATCACGACGTCTGGGCCTTCTGGTCCGATGAACGTCTAAAGACGAACATCCAGCAGATCGAAAATCCGCTCGAGAAGATCCGCCAGATCATGGGTGTCATCTATACCCACAACGAACTGGCTGCTCAGCTGACGGGTTGCGATACCAGTGTCGAGCACATGGGTTTGCTGGCGCAGCAGATCTTCGCGATTGCGCCGCAGCTGGTGGGTCCGGCTCCGTTTGACGTCGATCCGATCACGGGTGGTTCGATTTCGGGCGAGCACTACATCACGATCAAGTACGACAAGCTCGTGGCGTTGCTCGTGGAAGGCATCAAGGCCCTGGATAAGCAAACGCAGGATCACGAACAGCGTCTGCTCCAGCTGGAGGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e286e4be3d2a7ae685d751f8776197b6ab49761564f6baab781e3f6b16d1806c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7509
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Optimal preservation method of new biocontrol agent Burkholderia jumbophages having a potential suppressing rice seedling rot disease Kanaizuka,A., Sasaki,R., Miyashita,S., Ando,S. and Takahashi,H. 2022-11-19 — GenBank