Protein

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Genbank accession
YP_010059410.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
TSP
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MIPAWAEAWVDSQGRHWRLNDAGEPERIPTVSNPLGEGGGDTTKLTKAAADDLYVGRGDLMVNAKDAPYRAVGNGIVDDTAALQAAAAAVPNGGILFVPPGDYRISSTITNGGKSLMVYAYGARFINYGTGSVFSLSGGFESALAVSSLVEGTVQEVENALPAVILTVASSPSWKKGDAVRLVSDDVIPGGRPETGSTQRRLGQCFTVHEVSGTTVTLMGALDDPMTTNLRVARYRDIRCGLFGAIGTLRPDRVMPPASVGVTAVAANILTMAAERSLFAGQPVQFSGTTVPAGLTAGTTYYAIPVTSTTFRVATSAANAEAGMAVTISGPTASMTALFRTWNANTVFAFTGLRNVYARDFVVENSGGAAVAFNGCYGGSASNLDVRFAYDNVNTGSFGYGVLLSCSTDVTIFDYRAARVRHAYTDDTSQIAAGSANLHQYGRTKNCGVIRGTARDTSSTAWDTHHNGCQGFFIDCYVGNSPAAVAFRGRRHRVKDMRVENVRTAIRFFTEADGGESWGHDIDGVIGTARAAFQANIHPAGHPNAGVREMRASRVRNVELSGLSSYGTEINNAVVHLEQIKLRYAAVLVNFTRLNDWTNSEVRTYDNIEHDLSLLDATSAGNLRIHRVTPSLGATMSVRGKTILIRAASTVFSDKVSYIWEIDPYTGIDTTDVRVDYPASAYLSTNPATYSVLEYQNVYGNSDNSEWIGAADSAITSSATSSALRQTRAPVVIMNCIPTADRILVNFNDGRRRGQVLHLRNSGTANLTVKHGTAAKTVLVGGTDKVLAPGQMMTLIFIAGAGWTQSSPVA
Physico‐chemical
properties
protein length:810 AA
molecular weight: 86082,52880 Da
isoelectric point:7,24267
aromaticity:0,08025
hydropathy:-0,07222

Domains

Domains [InterPro]
DC_1178
STR
7–157
DC_1178 DC_1484
IPR012334
STR
53–160
IPR012334 IPR012334 IPR057996
IPR024535
ENZ
62–110
IPR024535
IPR011050
STR
69–532
IPR011050
YP_010059410.1
1 810
Architecture
STR
ENZ
STR 7-769 | ENZ 770-804 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010059410.1
1 810
Domain Start End Length (AA) Confidence
N-terminal 1 73 73 0,9609
Central domain 74 290 218 0,9877
C-terminal 291 810 519 0,2352
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-73
Central
74-290
C-terminal
291-810

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Skog
[NCBI] 		2704033 Uroviricota > Caudoviricetes > Skogvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010059410.1 [NCBI]
Genbank nucleotide accession
NC_054725.1 [NCBI]
CDS location
range 78797 -> 81229
strand +
CDS
GTGATTCCTGCATGGGCAGAAGCGTGGGTGGACAGCCAGGGCCGTCACTGGCGGCTCAACGATGCTGGTGAGCCCGAACGCATTCCGACAGTGTCGAATCCGCTCGGCGAGGGTGGTGGCGACACCACCAAGCTGACCAAGGCGGCGGCCGACGACCTCTACGTCGGCCGGGGTGACCTGATGGTCAACGCCAAGGACGCTCCATACCGTGCGGTGGGCAACGGGATCGTCGACGACACTGCGGCACTTCAGGCCGCTGCGGCCGCTGTGCCGAACGGCGGCATTCTCTTCGTTCCGCCGGGCGATTACCGGATCAGCTCCACCATCACCAACGGTGGGAAGTCGCTGATGGTCTACGCGTACGGCGCGCGATTCATCAACTACGGCACCGGATCGGTGTTCAGTCTGTCGGGTGGCTTCGAGAGTGCTCTCGCCGTCTCCAGCTTGGTCGAGGGCACTGTCCAAGAGGTTGAGAACGCCCTCCCTGCAGTGATTCTGACTGTCGCCAGCTCCCCCTCCTGGAAGAAGGGCGATGCGGTTCGGCTGGTGTCCGATGACGTGATCCCTGGCGGACGTCCGGAGACGGGGTCCACGCAACGACGTCTGGGCCAGTGCTTCACTGTTCACGAGGTGTCGGGCACCACGGTGACCCTGATGGGCGCGCTCGACGACCCCATGACCACCAATTTGCGGGTGGCGCGATACCGCGACATCCGGTGTGGCTTGTTCGGAGCGATCGGGACCCTGCGGCCAGATCGAGTCATGCCTCCGGCGTCGGTCGGCGTCACGGCGGTGGCTGCCAACATCTTGACGATGGCTGCCGAGCGATCGCTGTTCGCCGGACAGCCGGTGCAGTTCTCGGGCACCACGGTTCCTGCCGGGCTGACGGCAGGGACCACCTACTACGCCATCCCGGTCACCTCCACGACCTTCCGGGTGGCCACGAGCGCGGCCAATGCCGAGGCGGGGATGGCCGTCACGATCTCGGGCCCCACCGCCTCGATGACTGCTCTGTTCCGCACCTGGAACGCCAACACCGTCTTCGCCTTCACCGGACTGCGCAACGTCTACGCCCGCGACTTCGTCGTGGAGAACAGCGGCGGCGCGGCCGTGGCGTTCAACGGCTGCTACGGCGGCAGCGCAAGCAACCTCGACGTGCGGTTCGCCTACGACAACGTGAACACCGGCTCGTTCGGTTACGGCGTGCTCTTGTCGTGCTCGACTGACGTGACGATCTTCGACTACCGGGCCGCCCGGGTGCGGCACGCCTACACCGACGACACCTCGCAGATCGCCGCCGGGTCGGCCAACCTGCACCAGTACGGGCGCACCAAGAACTGCGGAGTCATCCGGGGGACAGCTCGCGACACCTCGTCGACCGCTTGGGATACCCACCACAACGGGTGTCAGGGATTCTTCATCGACTGCTACGTGGGGAACTCTCCGGCGGCCGTGGCCTTCCGAGGCCGACGCCATCGGGTCAAGGACATGCGGGTCGAGAACGTCCGGACGGCGATCCGGTTCTTCACCGAGGCCGACGGCGGTGAGTCGTGGGGTCACGACATCGACGGCGTCATCGGCACCGCCCGGGCCGCATTCCAGGCGAACATTCACCCGGCAGGCCACCCCAACGCGGGAGTGCGCGAGATGCGCGCCTCGCGGGTCCGCAACGTGGAACTCTCGGGGCTCTCGTCCTACGGCACCGAGATCAACAACGCCGTCGTCCACCTGGAGCAGATCAAGCTCCGTTACGCGGCCGTCCTGGTCAACTTCACTCGCCTCAACGACTGGACCAACAGCGAGGTCCGCACTTACGACAACATCGAGCACGACCTCTCGCTGCTTGACGCGACGTCGGCAGGCAACCTGCGTATCCATCGGGTGACCCCGTCCCTGGGGGCGACCATGTCGGTGCGTGGGAAGACGATCTTGATTCGAGCGGCTTCGACGGTCTTCTCCGACAAGGTGAGCTACATCTGGGAGATCGACCCCTATACCGGGATTGACACCACCGACGTCCGGGTGGACTATCCGGCCTCGGCGTACCTCTCGACCAATCCGGCGACTTACTCGGTGCTGGAGTACCAGAATGTCTATGGCAATTCGGACAATTCTGAATGGATCGGTGCTGCCGACTCCGCGATCACCAGCTCGGCGACTTCGTCTGCCCTGCGCCAGACGCGTGCGCCTGTGGTGATCATGAACTGCATCCCCACTGCCGATCGAATCTTGGTCAACTTCAACGATGGTCGCCGCCGAGGTCAGGTCTTGCATCTGCGCAATTCGGGGACTGCCAACCTGACGGTCAAGCACGGCACCGCCGCCAAGACGGTCCTGGTCGGAGGCACTGACAAGGTCTTGGCCCCCGGACAGATGATGACCCTGATTTTCATTGCAGGCGCTGGGTGGACCCAGTCGTCGCCGGTCGCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
6b12594350bf04862b9c3899e08e627e9737996d03e98213c94f9961892675c7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7572
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50