Protein

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Genbank accession
XYH45820.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MDNYLLRYAIDNVWQNPAVDRQYSYKLQQVTPRYGVRGNYVVEQTRYYLPTNNNRDYYHIYQIGQVIPANLGYPGKRDVWINLATLAQQDLTLIDVYQTNGIRYSMSETYVMVTSKSNLLVAVKLNDRFPALDDNNLYIHFYHNGYFNSPRSVDAGKHWIETRSGSAASAAAIRQLQIQLMDLVTAKGGFPMYFVNGKPVNEISIVTCQPGDYYDFVLDASIKKVVELKIEDLAVFNSTLDTQRKYILHYPGPSDDVIDYFDDLTVHLIKYGTAPGNYTGLTYHQNQGIWLRQLTHRDYSMPVTRVQELIAENPGWDGIGDTYVKLYIRHGAYARPLVADSSRIWELYKLSDTNILQCMTGTGANNPIWRAENLERAAYVEFMAAPAKQIYPITYNEPALTTQAKIDAQNFAGEVFGYHECAKLMNDNPAKVYVDPGTGLRRVDLAYYFWRNVTLFEYDSTGYLLGHYYQEGGQIYNVVNADCEYVEAITGKGSDDLHGVYGNEPVELNPYYNFRVYVCKVWGGIPTGEWVDITDAPDRNTYGFLDTTNLDAPVWNWVVPSTQYQGYLRTDEYFYLKELTFGDNPGIIRFAIAGVENQNGTMVNKTFEIPFGELDLFMNRKSMIYGLDFWDDGKMIAVSNLEARSTSGIQTILTRGTGFCSPEMKRYPPGELGFVEYDVLSNDSIYQIHTHKVQRIVVDGRYMDYHDVVFEEDAGGRVMDNVRNGAPYQIQTPQVVLKTVFENDYEARVADDQRDQWTSEAMTYYFPKRDRELVDVIERPYLVYSIFSNKVLYDLVKGTLKPPFINGQYSDQDIVNYMRGYEWMQPFDILNREYNTNHVRVYPHWNTLPIGLTDDQYTFYTRVLKLYLRQPMELSPFIYITRT
Physico‐chemical
properties
protein length:883 AA
molecular weight: 101960,50680 Da
isoelectric point:5,12940
aromaticity:0,14043
hydropathy:-0,40306

Domains

Domains [InterPro]
IPR055617
STR
2–881
IPR055617
XYH45820.1
1 883
Architecture
STR
STR 2-881 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYH45820.1
1 883
Domain Start End Length (AA) Confidence
N-terminal 1 130 130 0,6371
Central domain 131 872 743 0,8520
C-terminal 873 883 10 0,0968
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-130
Central
131-872
C-terminal
873-883

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Viktualia
[NCBI] 		3395522 Viruses >
Host Pseudomonas syringae
[NCBI] 		317 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYH45820.1 [NCBI]
Genbank nucleotide accession
PV037725 [NCBI]
CDS location
range 104739 -> 107390
strand -
CDS
ATGGATAACTATCTCTTGCGCTATGCAATTGATAACGTCTGGCAAAACCCTGCTGTAGATCGACAGTACTCGTATAAACTCCAACAAGTTACCCCACGTTACGGCGTACGGGGTAACTACGTTGTTGAGCAGACTCGGTATTACTTACCGACGAACAACAATCGAGACTACTATCACATCTATCAAATTGGTCAAGTGATCCCAGCCAACTTAGGCTATCCCGGTAAGCGGGACGTATGGATTAACTTGGCTACTTTGGCACAGCAGGACTTGACGTTGATCGACGTATACCAAACTAACGGTATTCGTTATAGCATGTCTGAAACCTACGTGATGGTTACCAGTAAATCCAACCTGTTGGTTGCGGTTAAACTGAATGATCGTTTCCCAGCCTTGGACGATAACAACCTCTATATCCACTTCTACCACAATGGCTACTTTAACTCTCCACGTAGTGTTGATGCAGGCAAGCATTGGATTGAAACCCGTTCCGGTAGTGCAGCTAGCGCCGCAGCTATTCGACAGCTACAGATTCAATTAATGGATCTGGTTACAGCTAAAGGTGGATTCCCAATGTATTTCGTAAACGGTAAACCCGTTAATGAGATCTCCATTGTGACGTGTCAACCCGGTGACTACTACGACTTCGTTCTGGATGCGTCCATTAAGAAAGTAGTTGAACTAAAGATTGAAGACCTAGCGGTATTCAACTCCACGTTAGACACGCAACGTAAGTACATCTTACACTACCCAGGTCCTAGTGACGACGTTATCGATTACTTCGATGACCTAACTGTGCACCTCATTAAGTACGGTACCGCTCCAGGTAACTACACTGGTCTGACTTACCATCAGAACCAAGGTATCTGGTTACGCCAACTGACCCACCGTGATTACAGCATGCCTGTTACACGAGTACAGGAACTCATCGCCGAGAACCCAGGTTGGGATGGCATTGGTGACACGTACGTTAAACTGTACATCCGTCATGGTGCGTATGCTCGTCCACTGGTAGCTGATTCTTCACGTATTTGGGAACTCTATAAGCTGTCGGATACAAACATTCTTCAGTGCATGACTGGCACGGGTGCTAACAACCCAATCTGGCGAGCAGAGAACCTTGAGCGAGCAGCTTACGTTGAATTCATGGCAGCTCCAGCTAAGCAGATCTACCCGATCACGTACAACGAACCAGCCTTAACCACACAGGCTAAGATCGATGCACAGAACTTTGCAGGGGAGGTCTTCGGCTATCACGAATGTGCTAAGTTGATGAATGATAACCCAGCTAAGGTTTATGTAGATCCGGGCACTGGGTTACGACGTGTAGACTTGGCGTATTACTTCTGGCGTAACGTCACGTTGTTTGAGTATGACTCCACAGGTTATCTGTTGGGTCATTACTATCAAGAAGGTGGCCAGATCTACAACGTGGTGAACGCGGACTGTGAGTACGTTGAGGCTATCACAGGTAAAGGTTCAGATGACCTTCACGGCGTCTATGGTAATGAACCCGTTGAACTTAATCCATATTACAACTTCAGAGTTTATGTCTGTAAGGTGTGGGGTGGCATTCCAACGGGTGAATGGGTTGACATCACTGATGCCCCAGATCGTAACACGTATGGTTTCTTGGACACTACCAACCTAGACGCCCCTGTCTGGAACTGGGTCGTACCAAGCACGCAGTATCAAGGTTACCTTCGCACAGATGAATACTTCTACCTGAAGGAACTCACCTTTGGTGATAACCCCGGTATCATTCGCTTTGCAATCGCGGGAGTTGAGAACCAGAACGGTACGATGGTTAATAAGACATTCGAGATTCCTTTCGGGGAACTGGATCTGTTCATGAACCGCAAGTCGATGATCTACGGATTAGACTTTTGGGATGACGGTAAGATGATTGCCGTGAGTAACCTTGAGGCACGTAGTACCTCGGGTATTCAAACGATCCTGACTCGTGGTACTGGGTTCTGCTCACCTGAGATGAAACGTTATCCACCAGGTGAACTAGGCTTCGTAGAATACGACGTATTGTCTAATGATTCGATCTATCAAATCCACACCCATAAAGTGCAACGGATTGTAGTAGATGGTCGATACATGGATTATCACGATGTAGTGTTTGAGGAAGATGCTGGTGGCCGTGTAATGGACAATGTCCGCAATGGTGCACCATATCAGATCCAAACTCCGCAAGTGGTACTCAAGACCGTGTTTGAGAACGACTATGAGGCCCGTGTAGCCGATGATCAACGCGATCAGTGGACTAGTGAGGCTATGACTTACTACTTCCCTAAACGCGACAGAGAGCTTGTAGACGTCATCGAAAGACCCTACTTGGTTTACTCGATATTCTCTAACAAAGTGCTTTACGATTTAGTGAAAGGTACCTTGAAGCCACCGTTCATTAATGGTCAGTATTCAGATCAAGACATCGTGAATTACATGCGTGGGTATGAGTGGATGCAACCGTTTGATATCCTCAACCGGGAATACAATACCAACCATGTGAGAGTTTATCCACATTGGAACACACTCCCAATCGGCCTAACCGATGATCAGTACACATTCTACACTCGAGTACTGAAGCTTTATCTCCGGCAACCGATGGAGTTGTCTCCATTTATTTACATCACGAGGACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8c4931adcfde4a0050c41e92467a58fbb6db1f4a7313fa0fa0d9ac3b35048d94
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9094
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50